This is super impressive and interesting #TeamTomo work by @carter-lab.bsky.social. Congrats everyone!! π§ͺ π§Άπ§¬
Posts by Ben Engel
Neat! Now if only we could get rid of all the surface ice chunks that land on our finished lamellae en route from our Aquilos to Titan π§π (yeah, yeah I know... glove box... or direct vacuum transfer...)
#TeamTomo if you want to use CTF-corrected 3D subtomos from AreTomo3 in RELION v.5.1 you can use this updated script:
github.com/Phaips/aretomo3torelion5
Before knowing anything else about this, I am excited because prediction of stoichometry is also an implicit prediction of allostery.
New protein complex stoichiometry prediction tool from talent PhD student @daniil-litvinov.bsky.social, check out the thread below!
Check out this awesome work from @daniil-litvinov.bsky.social: Protein complex stoichiometry prediction (both homomers and heteromers) from sequence, with some nice ablations showing what makes the difference!
Hereβs the link to Daniilβs thread π§΅ explaining why Stoic is so cool ππ§ͺ #AI #ProteinPrediction
bsky.app/profile/dani...
Stoic π¦Ύ from our shared student @daniil-litvinov.bsky.social predicts protein complex stoichiometry. A fun collab with @ninjani.bsky.social @torstenschwede.bsky.social - this #AI adventure beyond our core #CryoET methods was made possible by the @biozentrum.unibas.ch PhD Fellowship Program! π§ͺ π§Άπ§¬
started using --π¬π’π π¦π_ππ§π π in RELION5 Refine3D and all of a sudden every subtomogram average goes to high resolution π€―
#TeamTomo
This is a proud and exciting moment for me. Manon continues to redefine our understanding of pyrenoid biology, as she pushes the frontiers of #TeamTomo straight into the natural world around us πππΎπ¬
Her new group at @gmivienna.bsky.social will explore fresh and impactful questions. Check it out! π§ͺπ©βπ¬
Exciting opportunity to work in a lab thatβs pushing the boundaries of environmental sampling and work with an amazing scientist!!! π©βπ¬π¬
You want to work on carbon concentration mechanisms in algae π«? Go work with my (soon-to-be-former) colleague
@manondemulder.bsky.social in Vienna @gmivienna.bsky.social !
Cryo-ET π¬ and funky bugs π¦
#CryoET #CryoEM
I mean Vienna is not a bad place to be, but working and building and expanding and Cryo-ETing with @manondemulder.bsky.social can only make it a billion time better....
A bit late to the party- but this is one of the finest papers I have read in years. It is both super cool science, and does the near impossible in our field: grounding insights about the evolution of molecular mechanism in the ecological arena in which they (presumably) arose. It's a masterpiece.
So it turns out that chromatin in archaea takes the hellish form of a Lovecraftian tube worm πͺ±π₯
Love it! Thanks for the nightmare-fuel! π±
#ArchaeaSky @dodonova-sveta.bsky.social π§ͺ
@embl.org at its best: collaborative, open, transformative, and just the right amount of crazy. Dreaming of mechanistic cell biology *in the natural environment*? Dream no more, rent the AML.
www.biorxiv.org/content/10.6...
www.youtube.com/watch?v=jepb...
#WeFreezeOnTheBeach #ProtistsOnSky π¦ ππ§ͺ
So one day, I walk into our lab and @computingcaitie.bsky.social & @abimoye.bsky.social are carying eyeballs around everywhere π. Thanks for the eye-opening collaboration! (literally, ha!) π§ͺ
Great to see our paper on light-intensity dependent swimming patterns in #Chlamydomonas out now in Phys Rev Lett. as an Editors' suggestion! With a nice commentary by @philipcball.bsky.social.
Chlamy actively modulate the beat planes of their #cilia!
journals.aps.org/prl/abstract... #protistsonsky
Haha, I am notorious for my strong feelings on segmentation colors ππ¨ π§ͺ
But did we pick the exact right shade of pink? Maybe we should try five more? π
Pretty figure incoming @lowlab.bsky.social π€
Histones in archaea, you say? Check out this new paper from @dodonova-sveta.bsky.social @embl.org π π§ͺ
bsky.app/profile/dodo...
It's very cool! I already teach this awesome study from @florianwollweber.bsky.social & @pilhoferlab.bsky.social in my first-year cell bio class at the @biozentrum.unibas.ch
#ArchaeaSky #TeamTomo π§ͺ
www.sciencedirect.com/science/arti...
I agree. Grandstanding without putting more money in the pot π°. Funding is tighter than ever this year, even in Switzerlandπ¨π β¦the @snsf.ch is taking a big hit π£
Thanks Khaled π±π
Chloroplast-encoded small subunit extensions reshape the Chlamydomonas chlororibosome www.biorxiv.org/content/10.64898/2026.02.07.704542v1 #cryoEM
This is absolutely gorgeous work from @helenfoster.bsky.social, @margotriggi.bsky.social, @gaiapigino.bsky.social and colleagues π€©
#Chlamy cilia never cease to amaze!
At long last, the Chlamy chloroplast ribosome hat π© (now renamed the arm πͺ) is here to say helloπ! We first spotted this extended structure in green algae a decade ago, and @florentwaltz.bsky.social did beautiful work bringing it into focus! #CryoEM βοΈ #TeamTomo π¬ #PlantScience πΎ #ProtistsOnSky π§ͺ
For #ECRβs:
DBGβs Hot Tpoic Workshop
on Cryo-Electron Tomography + FIB-milling
13 β 15 April 2026
In @cellarchlab.com 's lab @biozentrum.unibas.ch
Organised by @tamb-o.bsky.social, Karen Zinzius, @fannyleblanc.bsky.social
Details: www.deutsche-botanische-gesellschaft.de/en/about-us/...
Thanks Johann! Big congrats on your beautiful work as well. Really jaw-dropping #CryoET!! π€© I agree there are some cool parallels between the systems π€ π§ͺ