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Posts by Pavol Bardy

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A bacterial CARD–NLR-like immune system controls the release of gene transfer agents - Nature Microbiology An immunity-like system functions as a lysis control hub to promote gene transfer agent particle release from host bacterial cells, suggesting that bacterial immune systems may be co-opted to promote ...

Great work run by @emmajbanks.bsky.social and @tunglejic.bsky.social showing that the gta lytic system in caulobacter evolved from a phage antidefence system. It was fun to collect tomo of these at SLAC and segment them with Mai at YSBL. www.nature.com/articles/s41...

4 days ago 5 2 0 0
Large-scale capsid-mediated mobilisation of bacterial genomic DNA in the gut microbiome - Nature Communications Here, the authors show that packaging of bacterial DNA by phage-like particles is widespread in the gut microbiome, with activity of gene transfer agents being prominent in Oscillospiraceae and Rumino...

We identified a new type of what seems to be a gene transfer agent in the most abundant gut microbe. Long read sequencing was the key here, as it showed suspiciously many 4kb and 8kb reads, which fits the smallest T=3 shrinked and T=3 regular capsids. And indeed, GTAs! www.nature.com/articles/s41...

2 months ago 2 1 0 0
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Was invited to give a talk about tomography at ccp4 summer school. The most important slide is done

8 months ago 1 0 0 0
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Same screen, three weeks later. At SLAC they sure know how to teach you to fib mill. Now, how to interpret the #tomo data?

9 months ago 1 0 0 0
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My second visit to SLAC-Stanford to learn more about cryoET. Look at the size of that screen! This is going to be fun!

10 months ago 5 0 1 0

We still have space for additional attendees, and we encourage you to share this invitation within your networks so others can benefit from the fantastic panel we have assembled for this edition. Better program than your favourite paid conference - just saying 😉

10 months ago 1 3 0 0

Could an immune system control release of gene transfer agents? Contributed here with tomograms of Caulobacter (check the beautiful segmentations done by my PhD student Mai) showcasing how the cell envelope changes when the immune system is present vs absent.

11 months ago 2 0 0 0
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What about your Easter Monday? #cryoem #remote #SLAC

1 year ago 3 0 0 0
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First time I am seeing holes in my aromatics, collected at #SLAC temalpha #cryoem. Full story hopefully by the end of the summer!

1 year ago 14 2 0 0
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Penton blooming of Ebor now on the cover of the April issue of mBio. #cryoET of #virus infection in toto

1 year ago 7 1 0 0
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"You cannot take a dewar from York to Leeds without a car!" "Hold my pint, mate!" #cryoEM @astburycentre.bsky.social

1 year ago 12 0 1 0
Segmentation of a tomogram of the host cell infected by Ebor

Segmentation of a tomogram of the host cell infected by Ebor

In toto #CryoET shows that Ebor, the representative of a single jelly roll fold #virus lineage, uses five receptor-binding protrusions to bring a single #capsid penton closer to the #host membrane, triggering subunits dissociation from the centre - penton blooming.
journals.asm.org/doi/10.1128/...

1 year ago 8 0 0 0

#cryoEM #cryoET #virus #assembly PhD project at Uni of York, UK - apply by the end of tomorrow
www.findaphd.com?pj=164040

2 years ago 4 0 0 0