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Posts by Cat Collins

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Transposable elements hitchhike on Starships across fungal genomes - Nature Communications Large mobile genetic elements known as Starships act as vehicles for transferring transposable elements (TEs) between fungi. Here, Griem-Krey et al. show that these ‘hitchhiking’ TEs can drive rapid e...

Now out!
We show that TEs can be horizontally transferred between fungal species via Starships. Once transferred, these TEs can become active, changing the genome organization and affecting the lifestyle of the recipient fungus.
www.nature.com/articles/s41...
@oggenfussursula.bsky.social #TEsky

4 weeks ago 87 56 0 2
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The ecology of horizontal gene transfer Horizontal gene transfer (HGT) generates genetic variation in populations across all domains of life; however, most studies focus on individual transf…

I have a new review out in TiG titled, “The ecology of horizontal gene transfer”! I’ve been thinking about these ideas for years and this field is growing so fast it’s becoming impossible to review it. I hope this paper sparks discussion on different ways we can look at DNA transfer!

1 month ago 31 17 0 1
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Genomic Perplexity and the Evolution of Context-Dependent Function Abstract. The fundamental principle that selection acts on a gene’s function often assumes implicitly that this function is fixed and intrinsic. However, e

New paper out in MBE! 🧵
"Genomic Perplexity and the Evolution of Context-Dependent Function"
The big idea: genes don't have fixed functions. Function emerges from context - genomic, cellular, environmental. And we can quantify this. academic.oup.com/mbe/article/...

1 month ago 61 18 3 0
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Regulatory features determine the evolutionary fate of laterally acquired genes in plants Abstract. Lateral gene transfer (LGT) is widespread in eukaryotes, including in animals and plants where it can fuel adaptive evolution and innovation. How

Ecstatic to see the first chapter of my PhD published in MBE!
Most laterally acquired genes in plants are degenerating - the retained genes may to be more successful because they bring over their own regulatory machinery
academic.oup.com/mbe/article/...

1 month ago 12 2 1 0
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Domestication Reduces Plant Immune Receptor Gene Repertoires Across Lineages Abstract. Plant domestication is sometimes associated with a reduction in the diversity of immune receptor genes, critical for pathogen recognition and def

Bourne et al. analyzed immune receptor gene repertoires of 15 domesticated crop species, showing that grapes, mandarins, rice, barley, and yellow sarson exhibit reduced immune receptor gene repertoires compared to wild counterparts.

🔗 doi.org/10.1093/gbe/evaf147

#genome #evolution #PlantSky

8 months ago 11 8 0 0
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Horizontal gene transfer and its role in crop adaptation and evolution at University of Sheffield on FindAPhD.com PhD Project - Horizontal gene transfer and its role in crop adaptation and evolution at University of Sheffield, listed on FindAPhD.com

Really cool project with a lovely lab, I've had a great time so far with the joys of HGT and would definitely recommend !! www.findaphd.com/phds/project...

1 year ago 2 0 0 0
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Our new paper shows that plasticity that has evolved to deal with one stressful situation, can help plants to adapt rapidly to new stressful situations. doi.org/10.1073/pnas... @meebangor.bsky.social @rbgkew.bsky.social @ukri.org @pnas.org

1 year ago 35 21 1 4
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