I am hiring a popgen postdoc!
Looking for a creative scientist to join us at USC to investigate recessive variation and complex traits in model or non-model species. The project is funded by a multi-year NIH grant, contract can be renewed.
Job add & details 👇🏽
usccareers.usc.edu/job/los-ange...
Posts by Alex Fraik
MT Field Tech alert! Come work on a project looking at co-evolution of Tailed Frogs and Cutthroat Trout in Montana in response to climate change #consgen #fieldbiology
Looking forward to reading this 👀 #consgen
Very cool work based on an amazing long term study of bighorn sheep: No Pedigree, No Problem: Genomic Inbreeding Tracks Genetic Rescue With High Resolution - Mitchell et al: onlinelibrary.wiley.com/doi/10.1111/...
New advancements for plexing in #gtseq with PlexSeq!
Neat case study from Matt Campbell and the Eagle Genetics Lab team for PBT and grandparentage analyses in Chinook Salmon in the Snake River #consgen
link.springer.com/article/10.1...
Escaping bottlenecks: The demographic path to genetic recovery in koalas (Phascolarctos cinereus) 🐨 🧬 #consgen #popgen
Conservation genomics and assisted introgression is saving the American chestnut from extermination by invasive non-native pathogens. #consgen
Hi @kbheinle.bsky.social would you mind if I DMed you about your Brown Trout GTSeq work?
Thank you!!
Anyone out there know of anyone using or developing #gtseq to genotype Brown Trout? #consgen #fishgen #fisheries
AmpliRAD: A New Method Combining Amplicon and RAD Sequencing - Thompson - 2026 - Ecology and Evolution - Wiley Online Library onlinelibrary.wiley.com/doi/10.1002/...
Fun news! @gcbias.bsky.social and I are teaching a 2-week online population genetics workshop this summer to raise money for the Center for Population Biology at UC Davis. We're trying to gauge interest -- please fill this out if you might be interested! And please share broadly!
📣Job alert!📣 Working as a federal scientist is complicated right now, but we are actually hiring. One *permanent* stock assessment position on my team at NOAA NWFSC will open for 7 days in early-mid Feb. Will be a shared ad across several science centers. Get those usajobs resumes polished...
We have compiled a special issue for @evolappjournal.bsky.social on Effective population size in Conservation and Biodiversity Monitoring, dedicated to the late Michael W. Bruford.
This SI is a must read for everyone who struggles with what "effective population size" means.
#consgen
Interested in👇 ?
- museomics: genome erosion, adaptation 🦌 🦜 🐬
- marcogenomics of sea warming (methods dev. or empirical data)
🌊 🐟🦭🐋
Check this call (2 y. postdoc) and get in touch to discuss potential projects (deadline 31.03.26)
#popgen #consgen #evolbiol
👉 www.scilifelab.se/data-driven/...
M.S. Opportunity: Riparian restoration tools in working grasslands The Genomics, Ecology, and Modeling for Conservation Lab at North Dakota State University, led by Travis Seaborn, is recruiting for one M.S. position to join our team working on a recently funded project in collaboration with the Albert K. Ekre Grassland Preserve. Anticipated start date: Summer 2026. Stiped ~$25,000 for 2-3 years. Tuition waiver also provided. The overall project will advance our ability to understand community responses to riparian restoration. Riparian ecosystems in the Northern Great Plains have been heavily altered by anthropogenic activities. Although there are numerous restoration options for riparian ecosystems, a common and effective restoration practice, in particular in incised stream systems, are beaver dam analogs. Using streams at the Ekre Grassland Preserve and nearby public land, we will be looking to do a restoration project using invasive buckthorn woody materials. To achieve this, we are beginning to plan a Before-After-Control-Impact design to assess riparian and floodplain ecosystem responses, including geomorphology, biological community, and water quality. Much of the beaver dam analog research that has been done has occurred in the western United States, and response to these activities in the Northern Great Plains is unknown. Surveys of the biological community may include electrofishing and minnow trapping for fish, camera traps for mammals, visual and auditory surveys for birds, and plant identification along transects. The primary goals of this position include: 1. Identify the impact of beaver dam analogs. 2. Using geographic information systems, develop beaver species distribution models for the region. To apply: Please email travis.seaborn@ndsu.edu a letter of interest, which should include an explanation of fit and past relevant experience, and CV by February 20th.
Kind of a late breaking MS opportunity in my lab - please share! Hoping to have someone this summer for some of the before data collection prior to a restoration project. Please don't hesitate to reach out with questions.
Job alert:
NOAA NWFSC & UW are looking for a postdoc (ASAP) in Seattle study foraging ecology of Cook Inlet beluga whales using eDNA. Genetics/ecology/eDNA experience preferred. Interested candidates reach out to kim.parsons@noaa.gov or rpkelly@uw.edu directly. #eDNA #ConsGen
Work by Bell, Kovach, Whiteley and colleagues demonstrates that even inbred trout source populations can be used for genetic rescue. Great news for folks considering translocation efforts, but are faced with the challenge of identifying suitable (genetically diverse) donor populations #ConsGen
Evaluating inbreeding and assessing the risk of outbreeding depression in genetic rescue using whole-genome sequence data
www.pnas.org/doi/10.1073/...
Putting Structural Variants Into Practice: The Role of Chromosomal Inversions in the Management of Marine Environments. New @marine-omics.bsky.social paper by Nadja Schneller with @janstrugnell.bsky.social, @mattfield100.bsky.social and Kerstin Johannesson out today doi.org/10.1111/mec....
Join our Tree of Life Programme as a Group Leader in Biodiversity Genomics at the Wellcome Sanger Institute. Lead ambitious, large-scale genomics research to understand life’s diversity on Earth.
🔗 Learn more and apply: sanger.wd103.myworkdayjobs.com/en-US/Wellco...
📅 Closing date: 8 February 2026
Flathead Lake Biological Station @umflbs.bsky.social searches for a new director following @drlimnology.bsky.social end of 2026. See details 👇
Team fish - we need your help! We are trying to build a database of all the fish chromosome-scale genomes where sex chromosomes have been identified. Have you build one or some? Do you know someone who has? Can you post the link in the comments? Please spread the word and repost! Thank you!
The value of structural variants to conservation genomics in the pangenome era
academic.oup.com/jhered/advan...
This doesn't seem to be a unique outcome, as fishers translocated into OR appear to have also more or less stayed put and kept to themselves. It would be great to see an updated synthesis of these historic translocation efforts, building off this great paper!
journals.plos.org/plosone/arti...
Interestingly, although significant time has passed, we observed no evidence of admixture between the Rocky Mountain and ancestors of the translocated, Midwestern fishers. In fact, we only identified one animal with midwestern genetic ancestry.
Using >30 years of data opportunistically collected by @usfs.bsky.social, state and tribal co-authors and partners (mostly from hair/poop), we were able to characterize the genetic ancestry of the endemic Rocky Mountain and translocated fishers distinctly across the landscape.
Ancestors of Fishers translocated decades ago into the Rockies in northern ID and MT persist! #consgen #fishers
academic.oup.com/jmammal/adva...
We have another publication out! 🎉🎉🎉
“Hybrids along a natural–anthropogenic gradient: improving policy and management across all levels of biodiversity.”
We explore how to deal with hybrids in conservation — scientifically and practically. A thread 🧵
conbio.onlinelibrary.wiley.com/doi/10.1111/...