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Posts by Tamas Nagy

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Our paper is now out in Science! Super excited to share our discovery that #mitochondria #pearling is the elusive mechanism driving the regular distribution and inheritance of #mtDNA nucleoids 🧬 [1/6]

2 weeks ago 170 63 3 5

For me, the most maddening thing is when AI boosters, or detractors, all seem to agree that AlphaFold is an unmitigated good and useful tool showing the power of AI.

I disagree. It's hit and miss. And the misses are REALLY expensive. Especially when the conversation suggests it is ALL HIT.

2 weeks ago 65 13 4 2

I don't think people fully appreciate how apocalyptic things are for US science. I haven't had any new funding since 2024, but I'm still ok since typical grants are for three years. This means next year I will be completely out of funding and will have to fire everyone in the lab. It's not great.

3 weeks ago 5376 2391 43 79
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A high-affinity split-HaloTag for live-cell protein labeling Nature Communications - Lin and colleagues present high-affinity split-HaloTag pairs for protein tagging and multiplexed labelling. This versatile system allows protein visualisation with diverse...

A high-affinity split-HaloTag for live-cell protein labeling. And much more.
www.nature.com/articles/s41...

3 weeks ago 131 53 2 1
1 month ago 3 0 0 1
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GitHub - aiming-lab/AutoResearchClaw: Fully autonomous & self-evolving research from idea to paper. Chat an Idea. Get a Paper. 🦞 Fully autonomous & self-evolving research from idea to paper. Chat an Idea. Get a Paper. 🦞 - aiming-lab/AutoResearchClaw

So excited to be drowning in new "findings". Coming soon to a journal near you! 🫠

github.com/aiming-lab/A...

1 month ago 1 1 0 1
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Federal funding for US biomedical research is moribund.

Since October 1 2025, NIH is -80% in new grants and -70% in values (total dollars).

Labs are closing down and researchers are leaving science.

To what end?

1 month ago 71 56 5 12

Do folks have a preferred protocol for bleaching fluorescent proteins prior to doing Immunofluorescence?

I tried a 3% H2O2 + 12mM HCl solution but I had severe cell detachment problems (despite everything being fixed).

1 month ago 0 0 0 0
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Evolution of error correction through a need for speed Kinetic proofreading is a class of error-correcting mechanisms in biology that expend energy to avoid mistakes during replication, transcription, and translation. Proofreading is typically assumed to ...

@science.org Evolution of error correction through a need for speed | Science #evolution 🧬🔬 www.science.org/doi/10.1126/...

2 months ago 41 13 0 1

Insane that anyone can just unleash hundreds of glorified spam bots on the public internet and harass people, with little to no repercussions. The person who fired up the agent might not even know that it’s doing this!

How are we as a society going to handle BS at this scale?

2 months ago 4 0 0 0
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An AI Agent Published a Hit Piece on Me Summary: An AI agent of unknown ownership autonomously wrote and published a personalized hit piece about me after I rejected its code, attempting to damage my reputation and shame me into acceptin…

Absolutely wild timeline we live in
TLDR: An agentic AI bot writes a takedown blog post of a matplotlib maintainer after he rejects its pull request. @arstechnica.com screws up and use AI to write a piece about the incident which hallucinates quotes. 🤦
theshamblog.com/an-ai-agent-...

2 months ago 4 0 1 0

🤩

2 months ago 1 0 0 0

Interesting study from *Anthropic* that found that AI use didn’t significantly speed up development on a novel task (w/ new Python async lib) but it did hurt understanding. Unsurprisingly, AI seems best at regurgitating common patterns and isn’t that helpful for novel ones. arxiv.org/pdf/2601.20245

2 months ago 2 1 0 0
an insect, a bird, and an elephant visualized with unit height scaling. insect is landscape shaped and the elephant is portrait shaped

an insect, a bird, and an elephant visualized with unit height scaling. insect is landscape shaped and the elephant is portrait shaped

Why is it that small animals like insects have a landspace body plan when viewed head-on, but larger animals like elephants are taller than wide?

With @m-v.bsky.social, we find out in our new preprint titled 'Size and shape of terrestrial animals' - arxiv.org/html/2602.00...

2 months ago 27 9 0 1
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Really excited to share our new paper in @nature.com! We uncovered how a physical instability of the cytoplasm coupled with the cell cycle drives cytoplasmic partitioning in early embryos #zebrafish #drosophila. Read more in this🧵 www.nature.com/articles/s41... 🤩
@poldresden.bsky.social @mpi-cbg.de

2 months ago 209 69 4 10

For all the talk about accelerating science, tools like this will likely slow things down because we have wade through mountains of AI garbage. The consequences need to grow for faking results.

2 months ago 2 0 0 0

Peer review science relies, more than we care to admit, on what @zey.bsky.social calls "load bearing frictions" that make it difficult to fake good science, and on trust that most ppl also value science itself & won't cheat just for personal gain. This creates the wrong environment for that to hold.

2 months ago 42 18 0 2
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Thanks for linking the actual study. I dunno, seems pretty interesting?

They're using multilevel mixed-effect models (pg 21) to track the same person over time to see how their relationship satisfaction improves at time t+1, given a time-saving purchase at time t, vs original satisfaction at t-1

3 months ago 2 0 0 0
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Chance favors the (theoretically) prepared mind In defense of the role of theory in innovation

Blog post: Chance favors the (theoretically) prepared mind
Data is big, machines are learning, so what good is theory anyway? Isn't most discovery driven by serendipity anyway, with theory mostly a "post-mortem"? I argue that this view discounts the value of theory.
open.substack.com/pub/arjunraj...

3 months ago 26 7 1 0

Good review on what’s going on at NIH.

“Polling consistently shows strong majorities favor federal investment in health research. The dismantling we’re witnessing is instead the result of a political moment in which a minority viewpoint holds disproportionate power.”

3 months ago 9 5 1 0
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New preprint 🥳! We made photoclickable HaloTag ligands to precisely control protein labeling on living cells. With it, we can do some cool multicolor stuff. Huge congrats to Franzi and all co-authors! Check it out 👇

www.biorxiv.org/content/10.1...

5 months ago 158 40 0 4

Wait, it’s playing here. Amazing! bsky.app/profile/hbra...

4 months ago 1 0 0 0
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While 𝘝. 𝘷𝘦𝘳𝘮𝘪𝘧𝘰𝘳𝘮𝘪𝘴 max temp is around 45°C, we found 𝘐. 𝘤𝘢𝘴𝘤𝘢𝘥𝘦𝘯𝘴𝘪𝘴 grows up to 63°C with optimal growth at 55-57°C🥵. We showed cellular replication via Ultrastructure Expansion Microscopy at 63°C. The previous limit for euks is 60°C!

4 months ago 16 4 1 1

Movie doesn’t seem to be playing 😞I would be super interested to see its motility!

4 months ago 1 0 1 0
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Cytokines control the physical state of immune tissue Unlike most solid-like tissues, immune tissue is protean and reconfigurable—its component cells can patrol vast territories, find rare cellular partners, and dynamically self-organize into functional ...

1/5: New preprint: Cytokines control the physical state of immune tissue. www.biorxiv.org/content/10.1...

Unlike structured organs (heart, liver), immune tissue can shapeshift to form functional structures like germinal centers (GCs), tertiary lymphoid organs, granulomas, etc.

5 months ago 17 6 1 0

Really cool work! Congrats @zjmaggiexu.bsky.social and @cellraiser.bsky.social!

5 months ago 2 0 1 0

Congrats Dr Sachweh! 🫡😁

5 months ago 1 0 0 0

This awful news…we’ll miss Zara deeply :(

5 months ago 2 0 0 0

Iconic!

5 months ago 1 0 0 0
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I had a great time presenting at the LLHF Annual Meeting. Lots of good feedback and lots to do!

5 months ago 3 0 0 0