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Posts by Shinichi Nakagawa

Nice to see our work featured in The Guardian — showing that sperm quality can decline the longer it is stored. @krishsanghvi11.bsky.social @itchyshin.bsky.social

3 weeks ago 24 9 0 0
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Study paper from the researchers @krishsanghvi11.bsky.social *, @rmdean.bsky.social*, @itchyshin.bsky.social, Klaus Reinhardt, @iremsepil.bsky.social and
Regina Vega-Trejo is published in

royalsocietypublishing.org/rspb/article...
3/3

3 weeks ago 5 3 0 0

I'm excited to announce that the @sortee.bsky.social Guidelines for Data and Code Quality Control in Ecology and Evolutionary Biology are now published in Peer Community Journal peercommunityjournal.org/articles/10....

1 month ago 30 21 1 0
Earth System Research and Training at FAU

We are looking for a postdoc (up to five years) interested in climate-driven plant extinctions! Working with @manuelsteinbauer.bsky.social and me and a large team on various aspects of Earth system sciences.

More information here: fau-earth-system-science.github.io

1 month ago 20 33 2 0
The SORTEE guidelines for data and code quality control in ecology and evolutionary biology

🧵 New paper out today in @peercommunityin.bsky.social Journal!

@joelpick.bsky.social et al. introduce the first standardised guidelines for data & code quality control in #ecology & #evolutionarybiology, on behalf of @sortee.bsky.social 🔓

doi.org/10.24072/pcj...

#OpenScience #EEB [1/5]

1 month ago 30 23 2 4
Simulated trait distributions for two groups with different shapes. Top left: distinct skewness. Top right: distinct kurtosis. Bottom: different correlations between two traits for two groups.

Simulated trait distributions for two groups with different shapes. Top left: distinct skewness. Top right: distinct kurtosis. Bottom: different correlations between two traits for two groups.

Differences between M & F are pervasive, but we often focus on #SexDifferences in the mean. @pietropollo.bsky.social @danielwanoble.bsky.social @itchyshin.bsky.social &co present #stats tools that allow comparison of #skewness, #kurtosis & correlations b'n groups @plosbiology.org 🧪 plos.io/4093nJs

2 months ago 21 8 0 0
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A comprehensive meta-analysis of exogenous estrogen, progesterone, and testosterone in animal models of ischemic and hemorrhagic stroke - Biology of Sex Differences Background Exogenous sex hormones have been extensively studied for their influence on stroke risk and outcome. This meta-analysis served to update the pre-clinical acute ischemic stroke (AIS) literat...

So excited to announce my most recent project is now in press!

Our meta-analysis looks at the effects of exogenous #estrogen, #progesterone, and #testosterone in pre-clinical models for 3 subtypes of #stroke: AIS, ICH, and SAH.

Catch it at Biology of Sex Differences here:

doi.org/10.1186/s132...

2 months ago 2 3 1 0
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Open invitation to collaborate with the Ocean Floor excellence cluster in Bremen and Oldenburg. Annual calls planned. Pls distribute
@eesaupe.bsky.social @moriakiyasuhara.bsky.social
@chrisklausmeier.bsky.social
@elenalitchman.bsky.social
@itchyshin.bsky.social @nmouquet.bsky.social

2 months ago 7 3 0 0
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Does human disturbance disrupt predator-prey temporal niche partitioning? Today in @natcomms.nature.com
we show that while there is no overall effect, the larger species of the dyad "loses" the temporal response race to humans.

www.nature.com/articles/s41...

2 months ago 14 8 1 0
Canada Impact+ Research Training Awards for Postdoctoral Scholars

Please contact me if you want to be nominated for a postdoc via this scheme - you need to live outside of Canada and I need to do so by 9 Feb (and need to start by March 2027) - www.ualberta.ca/en/graduate-... (I think you do need to have a competitive CV etc)

Please email me if you are interested

3 months ago 14 14 1 2

Go work with Shinichi and his wonderful team : )

3 months ago 3 1 0 0

Please repost - thanks!

3 months ago 0 0 0 0
Canada Impact+ Research Training Awards for Doctoral Students

There is a PhD version of this too - www.ualberta.ca/en/graduate-...

3 months ago 0 0 1 0
Canada Impact+ Research Training Awards for Postdoctoral Scholars

Please contact me if you want to be nominated for a postdoc via this scheme - you need to live outside of Canada and I need to do so by 9 Feb (and need to start by March 2027) - www.ualberta.ca/en/graduate-... (I think you do need to have a competitive CV etc)

Please email me if you are interested

3 months ago 14 14 1 2
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Promoting the use of phylogenetic multinomial generalised mixed-effects model to understand the evolution of discrete traits Abstract. Phylogenetic comparative methods (PCMs) are fundamental tools for understanding trait evolution across species. While linear models are widely us

Continuing our series on difficult comparative models - and how to address them properly - we’re happy to showcase another study, this time in @jevbio.bsky.social academic.oup.com/jeb/advance-... We will guide you through a series of increasingly complex models, from binary, through ordered to

6 months ago 9 4 1 0

We have an updated version of this preprint, available at:
ecoevorxiv.org/repository/v...
Fingers crossed the formal, final version will be out soon.

We think this highlights a major issue in how we study behavior (& more).

Thank you @sekharma.bsky.social & @itchyshin.bsky.social!

#evolution

6 months ago 7 4 0 0
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6 months ago 1 1 0 0
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Location‐Scale Meta‐Analysis and Meta‐Regression as a Tool to Capture Large‐Scale Changes in Biological and Methodological Heterogeneity: A Spotlight on Heteroscedasticity Meta-analyses are widely used to understand how species and ecosystems respond to global change, but most assume that variability among studies is constant. This assumption can hide important biologi....

Our recent paper looks at location-scale interfaces in comparative data. But predicting variance in variance extends much further - if you still have not have a look here onlinelibrary.wiley.com/doi/full/10.... (another recent paper in @globalchangebio.bsky.social). We show how extending the idea

6 months ago 11 7 2 1
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VACANCY - Independent research fellowships leading to tenured positions

We’re inviting applications from outstanding researchers who either hold, or wish to apply for, Independent Research Fellowships.

APPLICATION DEADLINE: 10 November 2025

Click here to apply: jic.link/Fellows

6 months ago 18 29 1 2
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Biology - UMass Boston Biology - UMass Boston

UMass Boston seeks a tenure-track Assistant Professor in microbial ecology, starting September 1, 2026. Apply by December 1, 2025. Details: http://www.umb.edu/academics/csm/biology #job

6 months ago 19 40 0 0
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By extending the comparative model we can assay the evolutionary signal in evolvability itself and test a number of biologically interesting trait configurations (codivergence, contra-divergence, ceiling effects, phenotypic integrations and more!)

6 months ago 3 3 1 0
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The models are notably more complex but fittable with modern Bayesian GLMM routines. Think of them as looking at mean and scale (usually variance) evolution along the tree, here in an example of two concurrent Brownian Motion dynamics driving diversification of both variance and means.

6 months ago 4 1 1 0
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Our newest paper is out in Methods in Ecol Evol @methodsinecoevol.bsky.social :) amazing team effort - we show that the traditional way of analyzing comparative data lacks finesse. besjournals.onlinelibrary.wiley.com/action/oidcS... w/ @itchyshin.bsky.social Yefeng Yang, Losia Lagisz & Ayumi Mizuno

6 months ago 18 10 1 0
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2 job adverts on a NERC project w myself + @darrenobbard.bsky.social on “What determines the virome: ecology and the environment, evolution, or species history?” early 2026 in
@uniexecec.bsky.social
- Postdoc: jobs.exeter.ac.uk/hrpr_webrecr...
- RA: jobs.exeter.ac.uk/hrpr_webrecr...
Pls share!

6 months ago 29 42 2 1
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Fellow econ folks! We are hiring! Come work with me and my delightful colleagues at The University of Melbourne!

Applications close November 23, 2025

Link: unimelb.wd105.myworkdayjobs.com/en-US/UoM_Ex...

6 months ago 21 19 0 1

Have you always thought about running simulations to make sure your models work the way you want them to? The new squidSim can help!

I'm very impressed with how @joelpick.bsky.social led this project and with the amazing final result!

7 months ago 4 1 0 0
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Casual Chat with Dr. James Steele YouTube video by AASPT

Clearly I'm grumpy about the state of research in the field atm, particularly how power analyses are performative and hypothesis testing is butchered... so resharing this chat I had with @runbabyo.bsky.social et al. where we talk about these topics www.youtube.com/live/b0rXmtx...

7 months ago 4 3 0 1
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio

Please consider applying to our open faculty position call that includes Ecology!

apply.interfolio.com/172075

7 months ago 12 11 0 1
squidSim: a flexible R package for structured and reproducible simulations in Ecology and Evolutionary Biology

Interested in simulating the kind of data that you might commonly find in evolutionary and ecological studies?

Then we have the R package for you - squidSim!!

Check our new preprint:
ecoevorxiv.org/repository/v...

7 months ago 67 34 2 6