We present TaxonMatch, a tool designed to align taxonomic names, resolve synonymy, and correct typographical and structural inconsistencies across species name databases www.biorxiv.org/content/10.6... #biodiversity #taxonomy #bioinformatics
and by comparing ecdysis patterns across other taxa, we observe that ecdysis in L. polyphemus shares features with other chelicerates despite differences in behavioural execution, and that broader comparisons across Arthropoda reveal both phylogenetic and convergent signals in ecdysis patterns.
Figure 1. Overview of morphological markers used in this study on the (A) ventral and (B) dorsal side of the horseshoe crab (HC). Microscope images of the morphological markers of L. polyphemus during intermoult: (C) aAnterior margin of the prosoma, (D) dorsal spinous process, and (E) lateral spines. Individual identifiers (HC-n) are shown at the bottom left of each photo.
Figure 3. Microscope images of the morphological markers of L. polyphemus during late pre-moult. (A,D) Anterior margin of the prosoma, (B,E) dorsal spinous process and (C,F) lateral spines. Top panel AโC: HC-5 (length = 6 cm), bottom panel DโF: HC-12 (length = 3.8 cm). Red arrows indicate the ecdysial gap. Individual identifiers (HC-n) are shown at the bottom left of each photo.
By tracking the morphological changes in the anterior margin of the prosoma, lateral spines and dorsal spinous process we were able to identify individuals in the early and late pre-moult stage, predict the onset of ecdysis, and distinguish post-moult and intermoult stages.
New preprint!! ๐๐
Can we tell if a horseshoe crab will moult ?
Will it moult tomorrow or maybe in a week? ๐ค๐
In this study, we developed a simple and non-invasive approach in determining the moult stage of the Atlantic #horseshoe crab by looking at key structures. #inverts #science
๐ฎ pokemon tree of life
for pokรฉmon's 30th anniversary, explore a visualization and field guide to 1,000+ pokรฉmon. what inspired them, where they came from, and how they connect.
ํฌ์ผ๋ชฌ 30์ฃผ๋
, 1,000๊ฐ ์ด์์ ํฌ์ผ๋ชฌ์ ์๊ฐํํ์ต๋๋ค!
โก๏ธ str.sg/viz-poke30
From our project on arthropod moulting, see also this great paper
Moulting combines deeply conserved metabolic and developmental pathways with lineage-specific gene modules related to exoskeleton formation, potentially facilitating adaptation of the exoskeleton to lineage-specific ecological contexts.
6/6
This lineage specific signatures are highly expressed in the middle of the moulting process exhibiting an inverse hourglass pattern. Mid-moult stages recruit younger genes related to:
โขCuticle development
โขPigmentation
โขSensory structure formation
โขChitin-based extracellular matrix components
(5/6)
Despite recovering a conserved set of genes majority of the DEGs during ecdysis are lineage specific.
(4/6)
In addition various genes involved in energy metabolism, tissue morphogenesis and immune/and melanization related genes are also co-expressed during ecdysis.
(3/6)
Classification of differentially expressed genes (DEGs) and their corresponding orthology distribution. Top: non metamorphic moults; bottom: metamorphic moults. "Class specific" are DEGs restricted to Malacostraca or to insects.
We identified various DEGs that are shared across lineages, including genes involved in:
โข Ecdysteroid metabolism and transporters
โข Chitin synthesis & cuticle organization
โข Post-ecdysial processes
(2/6)
New Preprint!! ๐ฆ๐ชฐ๐ฆ
In this study we compared moulting gene expression across insects and crustaceans. #insects #crustaceans
Thread โฌ๏ธ (1/6) www.biorxiv.org/content/10.6...
Molting nauplius
Just saw a video of a molting nauplius posted on reddit. ๐คฉ๐ฆ #crustmas
www.reddit.com/r/microscopy...
HAPPY HOLIDAYS TO ALL OF YOU!๐โจ
Christmas miracle, anyone?
Triops and their moults. #crustmas ๐งช๐
A new study shows that over 90% of insect biomass declines are driven by shrinking species numbers, posing a risk to ecosystem function. www.idiv.de/majority-of-... #biodiversity
๐ฏ ๐ฆ ๐ฆ
RegEvol: detection of directional selection in regulatory sequences through phenotypic predictions and phenotype-to-fitness functions www.biorxiv.org/content/10.1... ๐งฌ๐ฅ๏ธ๐งช github.com/mrrlab/RegEvol
link.springer.com/article/10.1...
@ebablab.bsky.social and I helped a bit in this really informative article by Robin Grob in the el Jundi lab on spatial orientation strategies in Lepidoptera. Have a read :-)
๐๐
Why are some species smaller than a paperclip while others grow longer than a school bus? How is body size evolution governed in animals? Out now in @pnas.org we tackle these longstanding questions through a genetic lens using my favorite group of fishes as our model!! www.pnas.org/doi/10.1073/...
Our lab has published a couple of major papers in the past few months, which I would like to highlight in this thread! ๐งต
A lot of pressure on the different grant schemes, and pretty much independent of career stage.
Latest work out today in @currentbiology.bsky.social
We find the fly development gene bicoid is much older than previously thought (~20 million yrs older!) ๐ชฐ๐งฌ
To pinpoint its origins we tackled the Diptera phylogeny, providing some resolution (many open questions remain).
๐ tinyurl.com/2vyuevpy
A very nice paper! @naturalselection.bsky.social Congrats!!!๐๐ช
Reference genome bias in light of species-specific chromosomal reorganization and translocations
And that's how you integrate digital elements into an exhibition. Part of the temporary "China's Dinosaur World" at the Shanghai Natural History Museum, China. Closing this November.
Video source: Shanghai Let's Meet
An array of 9 purple discs on a blue background. Figure from Hinnerk Schulz-Hildebrandt.
A nice shift in perceived colour between central and peripheral vision. The fixated disc looks purple while the others look blue.
The effect presumably comes from the absence of S-cones in the fovea.
From Hinnerk Schulz-Hildebrandt:
arxiv.org/pdf/2509.115...
The buff-tip moth (Phalera bucephala) has mastered a very particular kind of camouflage.
When they close their wings up, they resemble a broken twig.
Native to large parts of Europe, there's regional pattern variation that reflects the local tree species. This one best resembles birch twigs?
