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Posts by Nitzan Shabek

thank you🙏🏻

4 hours ago 0 0 0 0
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DMR6 undergoes SA–dependent conformational remodeling linked to turnover. We mapped the SCF ligase interactome during infection, revealing dynamic remodeling; & identified ligase DAF1 using TurboID-DMR6/DLO1. Thanks @shabeklab.bsky.social members, @justinwwalley.bsky.social, Zerbe+Dinesh-Kumar labs

5 hours ago 2 0 0 0
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🔥our latest study is now online @natcomms.nature.com we found that the salicylic acid catabolic enzymes DMR6/DLO1 are controlled by the ubiquitin system. SA modulates their turnover, revealing a regulatory circuit linking hormone metabolism to immune balance. www.nature.com/articles/s41...

5 hours ago 13 4 2 0
Postdoctoral Scholar position in the Coaker group
University of California, Davis
We are seeking a Postdoctoral Scholar to join our research program focused on immune receptor engineering and spatial analyses of plant pathogens interactions using computational and imaging approaches. The position will involve integration of molecular, imaging, and computational approaches. Relevant publications from the laboratory include Nature Plants (2025, PMID: 40721669), Proceedings of the National Academy of Sciences (2024, PMID: 38814867), and Cell Reports (2023, PMID: 37342910). https://www.coakerlab.org/
Qualifications:
•	Ph.D. in plant biology, molecular biology, genetics, computational biology, or a related field
•	Strong background in genomics and/or computational biology 
•	First author publications in peer-reviewed journals
•	Ability to work both independently and collaboratively in a multidisciplinary environment
•	Experience in plant innate immunity is preferred

Application Instructions:
The position is initially available for two years, with the possibility of extension based on performance and funding. Salary is based on the University of California postdoctoral salary scale (https://www.ucop.edu/academic-personnel-programs/_files/2025-26/represented-oct-2025-scales/t23.pdf). The salary range for this position is $69,073-$82,836 US Dollars/year. 
Review of applications will begin June 1, 2026 and will continue until the position is filled.
Please submit a CV, a brief statement of research interests (~1 page), and contact information for three references to glcoaker@ucdavis.edu. The research statement should describe your previous work, how your expertise aligns with ongoing research in the lab, and potential future research directions.

Postdoctoral Scholar position in the Coaker group University of California, Davis We are seeking a Postdoctoral Scholar to join our research program focused on immune receptor engineering and spatial analyses of plant pathogens interactions using computational and imaging approaches. The position will involve integration of molecular, imaging, and computational approaches. Relevant publications from the laboratory include Nature Plants (2025, PMID: 40721669), Proceedings of the National Academy of Sciences (2024, PMID: 38814867), and Cell Reports (2023, PMID: 37342910). https://www.coakerlab.org/ Qualifications: • Ph.D. in plant biology, molecular biology, genetics, computational biology, or a related field • Strong background in genomics and/or computational biology • First author publications in peer-reviewed journals • Ability to work both independently and collaboratively in a multidisciplinary environment • Experience in plant innate immunity is preferred Application Instructions: The position is initially available for two years, with the possibility of extension based on performance and funding. Salary is based on the University of California postdoctoral salary scale (https://www.ucop.edu/academic-personnel-programs/_files/2025-26/represented-oct-2025-scales/t23.pdf). The salary range for this position is $69,073-$82,836 US Dollars/year. Review of applications will begin June 1, 2026 and will continue until the position is filled. Please submit a CV, a brief statement of research interests (~1 page), and contact information for three references to glcoaker@ucdavis.edu. The research statement should describe your previous work, how your expertise aligns with ongoing research in the lab, and potential future research directions.

We are hiring! We’re excited to recruit a postdoc to our lab at UC Davis to work on plant immune engineering and single-cell analyses of plant pathogen interactions. Apply by June 1. Please repost. www.coakerlab.org/postdoctoral...

5 days ago 71 80 1 3
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Ubiquitin ligases in plant immunity: structural mechanisms and signaling The ubiquitin system is a central regulator of plant immunity, with E3 ligases conferring substrate specificity across diverse signaling pathways. This review synthesizes structural and mechanistic i...

Excited to share our latest review on ubiquitin ligases in plant immunity

onlinelibrary.wiley.com/doi/epdf/10....

2 weeks ago 13 5 1 0
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Senate and Federation Honor ‘Transformative,’ ‘Inspiring’ Academics The Academic Senate and Federation have announced their top awards, comprising 15 academics across various disciplines throughout the university.The awards cite the impact these academics have had on ...

Humbled and honored to receive the UC Davis Distinguished Teaching Award 🏅
Beyond our research mission, education & mentoring are at the core of what we do @ucdavis.bsky.social
& I’m grateful for the opportunity to teach such engaged & motivated students www.ucdavis.edu/news/senate-...

4 weeks ago 12 2 0 0
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Structural Insights into Plant Hormone-Sensing Mechanisms Plant hormones are essential small molecules that regulate plant growth, development, and systemic responses to environmental stimuli. These processes are mediated by complex signaling networks involv...

Excited to share our new review, now online @annualreviews.bsky.social : Structural Insights into Plant Hormone-Sensing Mechanisms
www.annualreviews.org/content/jour...

1 month ago 6 0 0 0
Designated Emphasis in Biotechnology (DEB)

UC Davis has a Designated Emphasis in Biotechnology that allows students to engage with industry professionals deb.ucdavis.edu. We also have shadowing programs that allow grad students to interact with and advise leadership grad.ucdavis.edu/CGPSA.

2 months ago 3 1 0 0
Proposed model: ASK1 integrates the plant stress-responsive proteome by dynamically transitioning from ABA-driven signaling networks to drought-induced proteostasis assemblies, functioning through both SCF E3 ligase–dependent and independent mechanisms.

Proposed model: ASK1 integrates the plant stress-responsive proteome by dynamically transitioning from ABA-driven signaling networks to drought-induced proteostasis assemblies, functioning through both SCF E3 ligase–dependent and independent mechanisms.

Our proximity labeling and quantitative proteomics suggest that ASK1/SKP1 assembles condition-specific networks, acting both within SCF E3 #ubiquitin ligases and through noncanonical interactions to coordinate #plant stress adaptation

3 months ago 2 0 0 0
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Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation Plants rely on rapid proteome remodeling to withstand fluctuating environmental conditions, yet how the ubiquitin system dynamically coordinates these multilayered responses remains unclear. Here we d...

Excited to share our latest work to close out 2025: Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation🌱 With @justinwwalley.bsky.social , we map how ASK1/SKP1 dynamically rewires protein networks during stress www.biorxiv.org/content/10.6...

3 months ago 4 4 1 0
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Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation Plants rely on rapid proteome remodeling to withstand fluctuating environmental conditions, yet how the ubiquitin system dynamically coordinates these multilayered responses remains unclear. Here we d...

Excited to share our latest work to close out 2025: Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation🌱 With @justinwwalley.bsky.social , we map how ASK1/SKP1 dynamically rewires protein networks during stress www.biorxiv.org/content/10.6...

3 months ago 4 4 1 0
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An emerging signaling hub: KAI2 at the nexus of phytohormone networks KAI2 signaling has emerged as a central integrator of plant hormonal networks, coordinating growth and stress responses despite the continued mystery surrounding its endogenous ligand. This review sy...

📚New 𝐅𝐨𝐜𝐮𝐬𝐞𝐝 𝐑𝐞𝐯𝐢𝐞𝐰:

🌱An emerging signaling hub: KAI2 at the nexus of phytohormone networks🌱

Highlights KAI2 as an integrator of plant hormone signaling, despite its unknown endogenous ligand.

✍️By Jacob Moe-Lange and Nitzan Shabek
@shabeklab.bsky.social

Read it here👉
doi.org/10.1111/tpj....

4 months ago 4 1 0 0
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Was super excited to host @shabeklab.bsky.social in Tel Aviv for the first time since starting my position here and to hear all about the cutting-edge science his lab has been up to since we parted ways! Truly inspiring talk. ✨🤩💪🌱 @ucdavis.bsky.social @telavivuni.bsky.social

4 months ago 3 1 0 0
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An emerging signaling hub: KAI2 at the nexus of phytohormone networks KAI2 signaling has emerged as a central integrator of plant hormonal networks, coordinating growth and stress responses despite the continued mystery surrounding its endogenous ligand. This review sy...

An emerging signaling hub: KAI2 at the nexus of phytohormone networks

onlinelibrary.wiley.com/doi/10.1111/...

4 months ago 5 1 0 0
PNAS Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...

excited to be part of this study published @pnas.org led by the wonderful Caroline Gutjahr 👏revealing how the GRAS protein RAM1 partners with WRI transcription factors to regulate genes essential for arbuscule formation & nutrient exchange in plant-fungal symbiosis www.pnas.org/doi/10.1073/...

11 months ago 12 2 0 0
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Cell-autonomous innate immunity by proteasome-derived defence peptides - Nature Proteasomal degradation of cellular proteins generate defence peptides constitutively and in response to bacterial infection. Such peptides might provide a source of natural antibiotics that...

Wow! The Proteasome generates antimicrobial peptides that directly affect bacterial membranes #proteostasis
www.nature.com/articles/s41...

1 year ago 27 11 0 0

🧪what with the demolition of #NIH funded #research, where, dare I ask, are our friends from #bigpharma? y'all good? mooched enough off of public-access NIH-funded research? Stocked up with PhD level scientists who were trained on NIH training grants to tide you over until Academia comes back?

1 year ago 150 35 9 0
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Evolution of interorganismal strigolactone biosynthesis in seed plants Strigolactones (SLs) are methylbutenolide molecules derived from β-carotene through an intermediate carlactonoic acid (CLA). Canonical SLs act as signals to microbes and plants, whereas noncanonical S...

Super excited to contribute to this amazing work on the evolution of interorganismal strigolactone biosynthesis
www.science.org/doi/10.1126/...

1 year ago 11 1 0 0
'Ubiquitin Lysine-Linkages' from the review 'Ubiquitin: a structural perspective' in Molecular Cell

'Ubiquitin Lysine-Linkages' from the review 'Ubiquitin: a structural perspective' in Molecular Cell

New to #ubiquitin? Been with it for a while? Either way this review may be for you 🤩

Excited to share our review article in @molcell.bsky.social, diving deep into everything #ubiquitin
Read here 👉: kwnsfk27.r.eu-west-1.awstrack.me/L0/https:%2F...

@cellpress.bsky.social
@wehi-research.bsky.social

1 year ago 57 23 1 0
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New Phytologist: Vol 244, No 6 <em>New Phytologist</em> is an international journal owned by the New Phytologist Foundation publishing original research in plant science and its applications.

🆕 Our Latest Issue is online now!

📚 nph.onlinelibrary.wiley.com/toc/14698137...

Highlights:
🌱 Announcing the 2024 Tansley Medal winner
🌱 Unravelling plant centromeres
🌱 Is auxin the key to improve crop nitrogen efficiency?
🌱 Vegetation responses to moisture conditions

1 year ago 24 9 1 1
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Excited to share that our research on the SCF E3 ubiquitin ligase interactome in plants is now published in New Phytologist and featured as the cover of the current issue! 🌱 @newphyt.bsky.social #ubiquitin #proteostasis
nph.onlinelibrary.wiley.com/share/CA8XRQ...

1 year ago 36 9 0 0

I made a starter pack for the plant proteostasis community - please let me know if I missed someone to add new members #proteostasis

1 year ago 43 23 3 1
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The email announcement of International Plant Growth Substances Association (IPGSA) Conference in 2025 in Fort Collins, Colorado, USA is just out! Please spread the word of what will be a very exciting conference in a beautiful place. #IPGSA2025

1 year ago 12 7 2 3
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Single‐cell proteomics differentiates Arabidopsis root cell types See also the Commentary on this article by van Schie & Weijers, 244: 1678–1680.

Final version of or single-cell proteomics paper is now published in the New Phytologist December issue! @dormichicken.bsky.social
nph.onlinelibrary.wiley.com/doi/10.1111/...

1 year ago 43 12 2 0
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Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation Nature Communications - Plant hormone levels are regulated by synthesis and breakdown, but the mechanism of strigolactone degradation remains unclear. This study reveals the structure of distinct...

our latest work @natureportfolio.bsky.social nature communications: Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation
rdcu.be/d0s6l

1 year ago 28 5 0 1
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Bacteria conjugate ubiquitin-like proteins to interfere with phage assembly - Nature To mitigate&nbsp;phage infection, an antiphage defence system in bacteria conjugates a ubiquitin-like protein to a structural&nbsp;protein of&nbsp;the phage, demonstrating that conjugation of ubiquiti...

Should've done this a long time ago, but here's my first post on #Bluesky.

Check out my postdoc paper on a bacterial ubiquitin-like defense system that we recently published!

www.nature.com/articles/s41...

1 year ago 87 29 3 1

Check out this list of ubiquitin and Ubl profiles to follow. Repost if you want me to add you to it. Let’s create a good community here ☁️ go.bsky.app/3VPQofn

1 year ago 49 48 6 1

I direct the UC Davis Biotechnology Program - looking forward to building #academicsky community! 🧬🧫🔬🧪🥼#ucdavis #biotech

1 year ago 18 2 0 0
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Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation Nature Communications - Plant hormone levels are regulated by synthesis and breakdown, but the mechanism of strigolactone degradation remains unclear. This study reveals the structure of distinct...

our latest work @natureportfolio.bsky.social nature communications: Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation
rdcu.be/d0s6l

1 year ago 28 5 0 1
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Mechanistic study of SCOOPs recognition by MIK2–BAK1 complex reveals the role of N-glycans in plant ligand–receptor–coreceptor complex formation Nature Plants - Wu et al. elucidate the molecular basis for SCOOPs perception by the MIK2–BAK1 immune complex and demonstrate an unexpectedly pivotal role of N-glycans in plant...

molecular basis of SCOOP perception by the MIK2–BAK1 immune complex rdcu.be/d0s5E

1 year ago 3 0 0 0
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