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Posts by Tom Rhys Bishop

Variation in predicted reaction norms in response to mean coldest month temperature (MCMT) across admixed Populus genotypes. The reaction norm of each genotype is shown as a separate line colored by species ancestry, with green indicating Populus trichocarpa and blue indicating Populus balsamifera. Predictions for the overall model (a, d) incorporate both yearly growth increment in centimeters (cm) and the probability of mortality; predictions for the conditional model (b, e) only predict growth, ignoring the probability of zeros arising from other processes including mortality; and predictions for the zero-inflated model (c, f) predict the probability of zeros arising from mortality. (a–c) Responses across the range of MCMT values at garden and home climates. Actual values of home climates (|) and garden climates (circle) used for model training are shown on the x-axis. (d, e) Responses based on distance from climate of origin (garden–home MCMT); positive values indicate a warmer climate and negative values indicate a colder climate. If genotypes perform best in environments similar to their home environment, growth should be highest and mortality should be lowest when the transfer distance is 0.

Variation in predicted reaction norms in response to mean coldest month temperature (MCMT) across admixed Populus genotypes. The reaction norm of each genotype is shown as a separate line colored by species ancestry, with green indicating Populus trichocarpa and blue indicating Populus balsamifera. Predictions for the overall model (a, d) incorporate both yearly growth increment in centimeters (cm) and the probability of mortality; predictions for the conditional model (b, e) only predict growth, ignoring the probability of zeros arising from other processes including mortality; and predictions for the zero-inflated model (c, f) predict the probability of zeros arising from mortality. (a–c) Responses across the range of MCMT values at garden and home climates. Actual values of home climates (|) and garden climates (circle) used for model training are shown on the x-axis. (d, e) Responses based on distance from climate of origin (garden–home MCMT); positive values indicate a warmer climate and negative values indicate a colder climate. If genotypes perform best in environments similar to their home environment, growth should be highest and mortality should be lowest when the transfer distance is 0.

Maps showing the predicted shift in species ancestry in the Populus hybrid zone, based on genotype-specific responses to mean coldest month temperature (MCMT). In (a, b), the color of the base layer shows the species ancestry of the studied genotype which is predicted to have the highest fitness (as measured by growth and mortality) in that location under historic (a) and future climates (b). (c) The change in optimal species ancestry between future (b) and historic (a) climates, indicating regions where increased Populus trichocarpa ancestry is expected to be beneficial in green, and regions with no change in gray. As MCMT increases, we predict that genotypes with higher P. trichocarpa ancestry may be able to outcompete genotypes with higher Populus balsamifera ancestry in some portions of the P. balsamifera range, favoring a northeastern shift of the P. trichocarpa range and the hybrid zone and into historically colder, more continental regions. Regions with MCMT values outside of the range measured in the common gardens (−13.05°C to 10.85°C) are masked and colored white. Actual ancestry of collected genotypes is shown as circles. Species ranges are shown as dark blue and green outlines (Little, 1971). The same predictions are mapped across North America, including the common garden sites (Supporting Information Fig. S15).

Maps showing the predicted shift in species ancestry in the Populus hybrid zone, based on genotype-specific responses to mean coldest month temperature (MCMT). In (a, b), the color of the base layer shows the species ancestry of the studied genotype which is predicted to have the highest fitness (as measured by growth and mortality) in that location under historic (a) and future climates (b). (c) The change in optimal species ancestry between future (b) and historic (a) climates, indicating regions where increased Populus trichocarpa ancestry is expected to be beneficial in green, and regions with no change in gray. As MCMT increases, we predict that genotypes with higher P. trichocarpa ancestry may be able to outcompete genotypes with higher Populus balsamifera ancestry in some portions of the P. balsamifera range, favoring a northeastern shift of the P. trichocarpa range and the hybrid zone and into historically colder, more continental regions. Regions with MCMT values outside of the range measured in the common gardens (−13.05°C to 10.85°C) are masked and colored white. Actual ancestry of collected genotypes is shown as circles. Species ranges are shown as dark blue and green outlines (Little, 1971). The same predictions are mapped across North America, including the common garden sites (Supporting Information Fig. S15).

Very happy to see our article comparing the responses of hybrid poplars in 17 common gardens, out now in @newphyt.bsky.social! We estimated reaction norms to predict how warming winters could change where different ancestries are favored.
nph.onlinelibrary.wiley.com/doi/10.1111/...

4 months ago 14 6 1 0
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🚨Fun PhD! 🚨 Fieldwork in UK botanical hotspot - Upper Teesdale - cool tech (telemetry, drones, LiDAR) & microclimate modelling to understand land-use*climate interactions. With me & Sean Twiss @durham.ac.uk, Sarah Greenwood @stir.ac.uk & CASE partner @naturalengland.bsky.social
Link: rb.gy/vex2tm

5 months ago 1 3 0 0

Two great PhDs on invertebrates being advertised here is OnE!

5 months ago 1 1 0 0
Advert for a PhD project in physiological entomology. Please go to www.bit.ly/PhysioAntsPhD for more info, and www.bit.ly/PhysioAntsApply to apply!

Advert for a PhD project in physiological entomology. Please go to www.bit.ly/PhysioAntsPhD for more info, and www.bit.ly/PhysioAntsApply to apply!

Advert for a PhD project in ecological entomology. Please go to www.bit.ly/MountAntsPhD for more info and application details.

Advert for a PhD project in ecological entomology. Please go to www.bit.ly/MountAntsPhD for more info and application details.

TWO PhDs in my lab at Cardiff Uni being advertised!
Co-supervision from @drlucyalford.bsky.social.

1. Physiological Entomology: www.bit.ly/PhysioAntsPhD / www.bit.ly/PhysioAntsApply.

2. Ecological Entomology: www.bit.ly/MountAntsPhD.

Get in touch for more details! 😀🐜⛰️🔬❄️🔥

5 months ago 4 0 0 2

This is going to be a really cool project! Thermal tolerance, hoverflies, nutrition, pollination. Lots to love!

Please apply!

5 months ago 1 0 0 0
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Looking for a PhD project supporting beneficial insects in a changing climate? 🪰🐝🌱

Then join us at @bristolbiosci.bsky.social with
@tbish.bsky.social of Cardiff University, and industrial partner Olombria.

DEADLINE 03 December

More information here 👉 bit.ly/4p9Pcyk
Apply here 👉 swbio.ac.uk

5 months ago 5 3 0 1
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Functional trait dissimilarity drives arboreal ant community assembly while competitive trait hierarchies shape colony performance in experimental mesocosms Read the free Plain Language Summary for this article on the Journal blog.

Do you like functional traits, competition, mesocosm experiments, ants and rigorous fieldwork in unusual tropical systems?

Then you might like this new paper - the last from my DPhil at Oxford- in Functional Ecology:

besjournals.onlinelibrary.wiley.com/doi/10.1111/...

6 months ago 3 2 0 0

Shannon's H, Simpson's D, and Pielou's J are useless in ecology. Fitting data with a compound abundance distribution based on the geometric series is a better way to quantify variation – and to estimate species richness. New paper in Ecology Letters.

onlinelibrary.wiley.com/doi/10.1111/...

8 months ago 41 12 5 5

We need more provocative papers like this …

7 months ago 26 4 2 0
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🦠 New Research - The gut microbiome shapes latitudinal differences in host immunity and pathogen load in a damselfly ➡️ buff.ly/0f99mq4

7 months ago 4 2 0 0
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PNAS Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...

🚨New paper out in PNAS🚨

Soil eDNA reflects regionally dominant species rather than local composition of tropical tree communities 🧬🌿🌳🌺🧬

We asked about the spatial scale of biodiversity captured by samples of DNA from tropical soils #Luquillo #eDNA. A short 🧵....

www.pnas.org/doi/10.1073/...

8 months ago 36 13 2 1
Composite image of the Proceedings B journal title, the manuscript title and the author list, alongside an image of a red-footed booby flying amongst palm trees. Some text reads: "Winds shape the behavioural decisions of red-footed boobies, impacting their foraging commutes and feeding behaviour".

Composite image of the Proceedings B journal title, the manuscript title and the author list, alongside an image of a red-footed booby flying amongst palm trees. Some text reads: "Winds shape the behavioural decisions of red-footed boobies, impacting their foraging commutes and feeding behaviour".

"Commuting in crosswinds and foraging in fast winds: the foraging ecology of a flying fish specialist" 💨🐦🐟

New @iomarinescience.bsky.social research out now in @royalsocietypublishing.org: doi.org/10.1098/rspb...

📸 @robinfreeman.bsky.social

🧪🌍🪶

8 months ago 50 31 2 2
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Reconsidering space-for-time substitution in climate change ecology - Nature Climate Change Ecologists often leverage patterns observed across spatial climate gradients to predict the impacts of climate change (space-for-time substitution). We highlight evidence that this can be misleading n...

New paper out on the dangers of using patterns across spatial climate gradients to predict what will happen with changing climate. That includes species distribution modeling. Space-for-time substitution can be misleading in sign, not just the magnitude of effects.
www.nature.com/articles/s41...

8 months ago 122 66 2 4
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Excited to share that we have just been awarded a NERC Pushing the Frontiers grant to work on between-group cooperation in the Shark Bay dolphins. We will soon advertise a 3 year post-doc to join the team - drop me an email if you might be interested! Pls share widely 🙏🏻

8 months ago 124 52 1 6

Hey Brian! Thanks for the insights, really interesting! We'll take it on board. :) Going to check out your papers now...

8 months ago 2 0 0 0
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NERC policy on resubmissions This policy only applies to research grant applications.

Really disappointing new policy from NERC banning resubmissions of grant applications

Many of us, including me, have won grants on resubmission,

using the reviews to improve the application

This is is neither fair nor productive
www.ukri.org/councils/ner...

9 months ago 61 27 8 9
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Metabolic traits are shaped by phylogenetic conservatism and environment, not just body size | PNAS Metabolic rate dictates life’s tempo, yet how ecological and environmental factors integrate to shape metabolic traits remains contentious. Conside...

Awesome to see our paper exploring competing hypotheses in macro/metabolic ecology out in PNAS.

Led by the all star @lilyleahy.bsky.social with a range of amazing folks including @funkyant.bsky.social @natejsanders.bsky.social @ianjwright.bsky.social.

Check it out!

www.pnas.org/doi/10.1073/...

9 months ago 31 7 2 0
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Phylosignal, 500 citations later My first R package, phylosignal, that I started more than a decade ago, has just passed its 500th citation. So I decided to take a little time to celebrate (we definitely don’t celebrate enough). I…

Phylosignal celebrates its 500 citations! 📦🎉

I've written a short blog post to celebrate and reflect on this 10-year old #rstats project. 👨‍💻

www.pieceofk.fr/phylosignal-...

9 months ago 14 5 0 0
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Heard of "Darwin's paradox"? It refers to Charles Darwin's observation that coral reefs are wildly productive despite occurring in nutrient-poor tropical oceans. Reefs are, so the story goes, oases in marine deserts 🏝️...

Turns out that 2/3 of these assertions are very wrong...

🌐
🦑🧪

🧵⬇️

10 months ago 121 55 3 3
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Post-doctoral fellow in functional genomics and ecophysiology Subject description The goal of the project is to uncover the mechanisms explaining why global warming and heatwaves reduce reproductive success and cause excess mortality in wild and domesticated war

I am looking for a postdoc wanting to use functional genomics to understand why birds 🐦 struggle with climate warming in @erc.europa.eu project #HotLife. Ideal candidate is a molecular evolutionarybiologist. Join us at @biologylu.bsky.social. Details 👇
shorturl.at/wijEq

Would appreciate a re-post!

10 months ago 41 64 0 1
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BES Macro 2025 A British Ecological Society specialist group conference for researchers in macroecology and/or macroevolution at any academic career stage.

It's the last day to apply for #BESMacro2025 ! Come join us in beautiful York for two days of awesome macro-scale science (plus an optional pre-conference workshop on scientific storytelling)

www.eventbrite.co.uk/e/bes-macro-...

10 months ago 13 9 0 0
Schematic diagram showing the major axes of tree crown architecture

Schematic diagram showing the major axes of tree crown architecture

So excited to finally share our new paper charting the global spectrum of tree crown architecture, out today at @natcomms.nature.com ‬🧪🌐

Paper link 🔗: www.nature.com/articles/s41...

A brief thread of what we found 🧵

10 months ago 145 63 5 3
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Closing tomorrow! Last chance to apply for postdoc to explore the role of animals in savanna ecosystem productivity & nutrient cycling! Link to job: tinyurl.com/53dy4584 #savanna #termites #largemammals

11 months ago 34 27 0 1
Illustration of a Greenlandic landscape, showing in the foreground Rhododendron lapponicum on a cliff, with sea ice and icebergs in the background. Illustration by Alberto S. Ballesteros (@asbillustration.bsky.social)

Illustration of a Greenlandic landscape, showing in the foreground Rhododendron lapponicum on a cliff, with sea ice and icebergs in the background. Illustration by Alberto S. Ballesteros (@asbillustration.bsky.social)

🌸Plant diversity dynamics over space and time in a warming Arctic 🌸

Our new study @nature.com analysed plant diversity change in >2000 tundra plots over 4 decades. We found that plants changed unevenly, mostly driven by warming and biotic interactions.

www.nature.com/articles/s41...

🧵 (1/7) 🌐🧪🌱🌍

11 months ago 178 62 7 12
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Exploring Nutrient Cycling in the Waterberg, South Africa Ecosystems researchers travel to the Waterberg in South Africa to collect baseline trait data with collaborators from Liverpool University and University of Pretoria

In February, Yadvinder & Eleanor traveled to South Africa to collect trait data at collaborator, Kate Parr’s @funkyant.bsky.social field site for her new ‘The Green Stuff’ Project.
@naturerecovery.bsky.social

We cover this visit in a visual way on our blog
www.oxfordecosystems.org/post/explori...

11 months ago 11 4 0 0
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Life on the dry side: a roadmap to understanding desiccation tolerance and accelerating translational applications - Nature Communications Desiccation tolerance is an extreme adaptation to water limitation. Here the authors envisage a roadmap to advance desiccation tolerance research, highlight key knowledge gaps, call for standardizatio...

our perspective on desiccation tolerance research is out in
@naturecomms.bsky.social. with nearly forty authors from around the world spanning diverse career stages and disciplines, this work represents a shared vision for the field. let us know what you think!
www.nature.com/articles/s41...

1 year ago 34 18 1 2
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News A very busy month in the Traits Lab! Tom and Phil were establishing the new MicroMaze  project in the Cederberg mountains of South Africa and figuring out our new physiological experiments in...

Excited to have kicked off our @hfspo.bsky.social project MicroMaze with Andrew Davies, Charlene janion-Scheepers and @rebeccasenior.bsky.social in the Cederberg mountains.

News update and pics on my website here: www.bishoptraitslab.com/news.html

1 year ago 6 0 0 0

100%

1 year ago 1 0 0 0
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BES Macro 2025 A British Ecological Society specialist group conference for researchers in macroecology and/or macroevolution at any academic career stage.

Registration is OPEN for #BESMacro2025, the best conference in town. This year we're in York: 10-11 July main conference, 9 July pre-conference scicomm workshop. If you do macroecology or macroevolution, please join us!

www.eventbrite.co.uk/e/bes-macro-...

1 year ago 7 3 0 0

Rochelmeyer et al. investigate the use of drone-based surveys to count and assess tree hollow accessibility in a tropical savanna south of Darwin, Australia 🌳📈

Check out their findings 👇
https://buff.ly/3WCSvT0

🌎🧪

1 year ago 7 5 0 0