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Posts by Dutch Society for Mass Spectrometry

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🚨 Heads up, team mass spec: abstract deadline 30 April 📢

The next NVMS meeting (29 June, LUMC Leiden) is coming up fast! Don’t miss out and submit your abstract by 30 April: lnkd.in/ew2uBdpc

Showcase your work, connect with academia & industry, and compete for the poster prize.

Your NVMS board 🎉

5 hours ago 1 1 0 0
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A nature-inspired ion trap for parallel manipulation of ions on a massive scale A nature-inspired ion trap enabling massively parallel mass spectrometry.

A nature-inspired ion trap for parallel manipulation of ions on a massive scale | Science Advances www.science.org/doi/10.1126/.... Very nice work by Brian Chait and Andrew Krutchinsky from @rockefeller.edu inspired by parallel sequencing in genomics and other technologies. Congratulations

1 month ago 17 4 0 1
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Editorial for the Special Honor Issue Honoring Dr. Carlito B. Lebrilla Mass Spectrometry Reviews, EarlyView.

(MS Reviews) Editorial for the Special Honor Issue Honoring Dr. Carlito B. Lebrilla: Mass Spectrometry Reviews, EarlyView. #MassSpectromRev #MassSpecRSS

2 days ago 4 3 0 0

NovoGlyco: mapping protein glycosylation in prokaryotes
Martin Pabst, Dinko Soic
bioRxiv 2026.04.15.718822; doi: doi.org/10.64898/202...

3 days ago 4 1 0 0
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We did a plasma proteomics study on dengue disease severity in children with Tineke Cantaert and identified early markers of endothelial and inflammatory activation. Great work by @tshamorkina.bsky.social and Sofia! Thanks to all co-authors @hecklab.bsky.social.
www.medrxiv.org/content/10.6...

4 weeks ago 16 9 1 0
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Integration of alternative fragmentation techniques into standard LC-MS workflows using a single deep learning model enhances proteome coverage - Nature Methods An integrated mass spectrometry platform enabling automated collision-, electron- and photon-based fragmentation techniques is presented. A deep learning-based model trained to predict spectra across ...

A mass spectrometry platform integrates alternative fragmentation techniques into standard LC-MS workflows for broader community adoption.

www.nature.com/articles/s41...

4 weeks ago 7 3 0 0
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Steve Brunton

Steve Brunton‘s YouTube Channel on statistics and machine learning - what a fantastic ressource for students and life-long learners:
www.youtube.com/@Eigensteve

#OpenScience #Statistics #MachineLearning #Learning

3 weeks ago 2 1 0 0
First 20 Years of Orbitrap Mass Spectrometry as the Mainstream Analytical Technique This review traces the first 20 years of Orbitrap mass spectrometry as a mainstream high‑resolution and accurate‑mass (HR/AM) technology. It outlines the historical development of the Orbitrap analyz...

Review on 20 years of Orbitrap MS!
analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/...

From early days to today’s hybrid & Tribrid systems, it highlights how innovation, accessibility, and new applications shaped the field.
Orbitrap => true workhorse of modern MS 🔬

1 week ago 6 3 0 0
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Mobilion Demonstrates Feasibility of SLIM Ion Mobility for Proteomics In a pair of preprints, researchers used the technology for quadrupole-free mass spec-based experiments, an approach that could boost speed and sensitivity.

A birds eye perspective on the company proposing quadrupole-free proteomics.

Additionally, see which vendors are suggested to most benefit from Mobilion's IMS approach

www.genomeweb.com/proteomics-p...

1 month ago 6 3 1 0
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These HTA proteases from archaea work great for mass spec-based antibody sequencing. Paper out now in final form at Cell Systems. Congrats to @tshamorkina.bsky.social @tkadava.bsky.social @lperezpaneda.bsky.social and @hecklab.bsky.social
www.sciencedirect.com/science/arti...

1 month ago 23 14 1 1
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Deep coverage and extended sequence reads obtained with a single archaeal protease expedite de novo protein sequencing by mass spectrometry Highly efficient hyperthermal acidic proteases combined with hybrid-fragmentation schemes provide five times more unique peptide reads than trypsin or chymotrypsin, greatly boosting confidence in de n...

Deep coverage and extended sequence reads obtained with a single archaeal protease expedite de novo protein sequencing by mass spectrometry: Cell Systems www.cell.com/cell-systems.... How great would it be to sequence proteins without a gene-template! We might be approaching this soon.

1 month ago 17 7 0 0
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News in Proteomics Research blog post | Charge detection mass spectrometry of intact HIV Envelope Proteins - with Glycoform information!?! proteomicsnews.blogs...

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#proteomics #prot-other

1 month ago 2 1 0 0

Don’t miss out, only a few days left to submit your travel grant application (deadline 1st Feb 2026)! 😱😄 Apply here: www.nvms.nl/index.php/co...

2 months ago 0 0 0 0
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Tandem FAIMS and IMS Combined with MS/MS for Effectively Probing the Structural Diversity of Proteins pubs.acs.org/doi/10....

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#proteomics #prot-paper

2 months ago 2 1 0 0
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A Universal Spectrum Annotator for Complex Peptidoforms in Mass Spectrometry-Based Proteomics Accurate and comprehensive peptide spectrum annotation is a crucial step to interpreting mass spectrometry-based proteomics data. While peak assignment in peptide fragmentation spectra is central to a...

A Universal Spectrum Annotator for Complex Peptidoforms in Mass Spectrometry-Based Proteomics | Analytical Chemistry pubs.acs.org/doi/10.1021/.... Making your data better viuable, no matter whether it is "boring" proteomics, or more exciting glycoproteomics, cross-linking mass spectrometry etc.

3 months ago 21 2 0 0
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ProteoBench: the community-curated platform for comparing proteomics data analysis workflows Mass spectrometry (MS)-based proteomics is a well-established strategy for analyzing complex biological mixtures. Many MS instruments and data acquisition strategies are available, and the data they a...

We are happy to share that the preprint for Proteobench is available now on biorxiv!
Check it out here: www.biorxiv.org/content/10.6...
Congratulations and thanks to everyone involved for the great effort!

4 months ago 9 5 0 0
LinkedIn This link will take you to a page that’s not on LinkedIn

An exciting 2026 ahead for mass spectrometry in the Netherlands 🎉
Eight travel grants to support early-career researchers attending IMSC 2026 ✈️🔬
Details and applications (deadline 1 Feb 2026): lnkd.in/eHavM4BG
Wishing you all a successful 2026!
Your NVMS board

3 months ago 1 0 0 1
NVMS Nederlandse Vereniging voor Massaspectrometrie

A BIG THANK YOU to everyone who joined us at the NVMS Fall Meeting 2025! 👏 Your energy and ideas made the meeting truly inspiring and a great fit for the House of Connections. ✨♥️ A recap will be online soon: www.nvms.nl Your NVMS board
#NVMS #MassSpectrometry #ScienceCommunity #DEI #Groningen

5 months ago 3 1 0 0
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Great work 👍 thank you for joining!

5 months ago 0 0 0 0
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On my way to the @denvms.bsky.social fall meeting to present our antibody sequencing work 😁

5 months ago 3 1 1 0
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From Identification to Insight: Making Full Use of the Diagnostic Potential of MS/MS Proteotyping in Clinical Microbiology Using Efficient Bioinformatics pubs.acs.org/doi/10....

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#proteomics #prot-paper

5 months ago 4 3 1 0
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Thermal Tracks: A Gaussian process-based framework for universal melting curve analysis enabling unconstrained hit identification in thermal proteome profiling experiments Thermal Tracks is a Python-based statistical framework for analyzing protein thermal stability data that overcomes key limitations of existing thermal proteome profiling (TPP) work-flows. Unlike stand...

For those who perform thermal proteome profiling (TPP) experiments, you might find this new data analysis approach (and open source Python software) useful. Developed by postdoc @jfhevler.bsky.social 🙏

arxiv.org/abs/2508.096...

5 months ago 45 12 0 0
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NVMS Fall Meeting 2025 – Program Announced! - NVMS We are pleased to share the full program for the upcoming NVMS Fall Meeting, taking place on Wednesday, November 19, 2025, at the House of Connections in Groningen.

We are excited to share the final program for the NVMS Fall Meeting on November 19, 2025, at the House of Connections in Groningen. Download the program here: www.nvms.nl/index.php/nv...

See you all there! 😀🧪✨

#NVMS #MassSpec #RUG #Science

5 months ago 3 3 0 0
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Hey #TeamMassSpec,

Many non-human proteomics studies still search against taxon-filtered FASTAs.

❌ Redundant sequences
❌ Inflated search space
✅ Reference proteomes cut redundancy, improve annotation, and make results comparable.

👉 Time to move beyond taxon filters. #proteomics #massspec #uniprot

6 months ago 9 2 2 0
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Breaking barriers in the sensitive and accurate mass determination of large DNA plasmids by mass photometry Heck and colleagues developed a mass photometry-based method for accurate and fast mass determination of plasmid DNA. Conventional mass photometry methods are not applicable for large DNA particles; h...

Breaking barriers in the sensitive and accurate mass determination of large DNA plasmids by mass photometry: Molecular Therapy Nucleic Acids www.cell.com/molecular-th.... Even visualizing > 10 million Da plasmids by the incredible Eduard Ebberink

7 months ago 10 3 1 0
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Modanovo: A Unified Model for Post-Translational Modification-Aware de Novo Sequencing Using Experimental Spectra from In Vivo and Synthetic Peptides Post-translational modifications (PTMs) play a central role in cellular regulation and are implicated in numerous diseases. Database searching remains the standard for identifying modified peptides fr...

Excited to share Modanovo, our transformer-based method for de novo peptide sequencing, which supports a broad range of post-translational modifications (PTMs)!
www.biorxiv.org/content/10.1...
#proteomics #massspectrometry #PTM

7 months ago 13 5 1 0
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Molecular Characterization of Natural Organic Matter Using Complementary Liquid Chromatography–Mass Spectrometry and Gas Chromatography–Mass Spectrometry Techniques Given the impact of natural organic matter (NOM) on water quality and treatment, understanding its properties is essential in water chemistry. However…

Molecular Characterization of Natural Organic Matter Using Complementary Liquid Chromatography–Mass Spectrometry and Gas Chromatography–Mass Spectrometry Techniques #JChromA www.sciencedirect.com/science/arti...

6 months ago 3 2 0 0
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What does a language model know about proteins? www.nature.com/artic...

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#proteomics #prot-paper

6 months ago 1 1 0 0

Great news! 🎉 The abstract deadline is extended to Oct 7, 2025! Don’t miss your chance to share your work 🚀 #NVMS #MassSpec

6 months ago 0 0 0 0

Join us for the NVMS Fall Meeting 2025 with the Dutch Mass Spec community!!!🧪✨😀

📅 19 November 2025
📍 House of Connections, Groningen

🎤 Present your research! Submit an abstract for a poster or oral presentation: www.nvms.nl/index.php/re...

Your NVMS Board

#NVMS2025 #MassSpec

7 months ago 3 1 0 1