Events | Combine: Coordinating standards for modeling in Biology

Computational Modeling in Biology Network (COMBINE) workshop for standards in systems biology UW–Madison Oct 20-23 2025 co.mbine.org/events/

Overexpression of SEMA7A as a marker of poor prognosis for rare, adrenocortical cancer (ACC); bit.ly/469Y8gp

HOME - ISMB/ECCB 2025 ISCB - International Society for Computational Biology

Late-Breaking Poster Submissions Call: Bio-Ontologies & Knowledge Representation (BOKR) COSI @ ISMB 2025 Liverpool UK July 20-24
Site bit.ly/3EK9j4M
Topics: Knowledge graphs and ontologies & their methods/applications
Deadline: May 15

Can you guess who our keynote speaker for the joint #BOSC2025 / BOKR (@bokr.bsky.social) session will be? It’s someone who’s well known in #Bioinformatics #OpenSource and #Ontology communities. Hint: traveling to the UK for #ISMBECCB2025 will bring this speaker close to where they grew up.

We review how to enhance deep learning architectures (convolutional & graph neural networks) with molecular interactions, gene sets, and ontological hierarchies to enhance accuracy & interpretability as part of predictive tasks bit.ly/4kwR7eN

Anti-cancer effect of oxyphenisatin acetate in triple-negative breast cancer shown in patient-derived xenografts; TRPM4 as biomarker bit.ly/43gimEj

Cilengitide sensitivity is predicted by overall integrin expression in breast cancer Treatment options for triple-negative breast cancer (TNBC) are limited and patients face a poor prognosis. Here, we sought to identify drugs that target TNBC vulnerabilities and understand the…

Advancing the search for biomarkers to combat triple-negative breast cancer with integrin inhibitors; study analyzed CRISPR and proteomics followed by experimental validation of hypotheses of pre-clinical model sensitivity

BOKR - 2025 Meeting About Bio-Ontologies and Knowledge Representation (http://www.bio-ontologies.org.uk/) is an International Society of Molecular Biology (ISMB) Community of Special Interest (COSI) and working group…

Submissions Call: Bio-Ontologies & Knowledge Representation (BOKR) COSI @ ISMB 2025 Liverpool UK July 20-24

Site https://bit.ly/4hO8dTh & ISMB https://bit.ly/40Vrqvy
Topics New knowledge graphs/bases, and ontologies & their methods/applications

Abstract Deadline: April 17

It was a pleasure to be interviewed by @anacastillo.bsky.social for my work on computational & network biology resources & methods to study cancer; with thoughts on careers in #bioinformatics shared with #BioinfoBridges of the ICSB student council

Sarcoma_CellMinerCDB: a comprehensive, pharmacogenomics data resource for 133 sarcoma cell lines to advance drug discovery for sarcoma; pubmed.ncbi.nlm.nih.gov/38868205/ listen to an auto-generated NotebookLM podcast summary: youtu.be/ZWPlMYf1O38