Mark your calendars for the #HuBMAP Workshop on Jan 29th!
💻Hands-on intro to the HuBMAP Data Portal: ASCT+B tables, spatial & single-cell data, visualizations, downloads, and in-place analysis with Workspaces.
Apply by Jan 22 👉 cmu.zoom.us/meeting/regi...
On the #TranslatingProteomics #podcast, #spatialProteomics pioneer Fiona Ginty explains why she's excited about the Human BioMolecular Atlas Program or HuBMAP, a multimodal exploration of human tissues.
www.youtube.com/watch?v=xdDO...
#Proteomics #Biology #HuBMAP #Pathology #SingleCell #HuBMAP
Sidhartha Goyal (U Toronto) on Competition across scales in biology in the Human Atlas Methods session.
📺 youtu.be/Bz7gRTYPiM8?...
YT Playlist: youtube.com/@CNSCenter/p...
#MultiscaleHuman #HRA #CNS #Teamwork #Collaboration #Biomed #HumanPhysiology #CIFAR #Research #HuBMAP
Hour 14 (1AM) of the 24hr Human Atlas event 🎥 Catch the talks by Mark Musen & Andrea Radtke now on CNS’s YouTube! ▶️ youtu.be/grAb0TIh4PI
Full playlist: youtube.com/@CNSCenter/p...
#Ontologies #CNS #HRA #HuBMAP #CIFAR #biomed #research
HuBMAPR
R package to retrieve data from #HumanBioMolecularAtlasProgram #HuBMAP
"Ancestor & descendant records for the donor, sample, and dataset"
bioconductor.org/packages/HuB...
#BioinfoAdv 2025
academic.oup.com/bioinformati...
#HumanBioMolecularAtlasProgram #HuBMAP
3D #HumanReferenceAtlas
#CommonCoordinateFramework for multiscale🧍molecular anatomy
Cell type➡️
Neighborhood➡️
Community➡️
Functional tissue unit
Dataset
>800 Kidney
0 #SkeletalMuscle🥲
@naturemethods.bsky.social 2025
portal.hubmapconsortium.org
🧬Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage🔗Read the full study: www.nature.com/articles/s41...
#HuBMAP #3DHumanAtlas Yashvardhan Jain, Bruce Herr
@bherr2.bsky.social @katyborner.bsky.social Katy Börner, Griffin Weber, Andreas Bueckle
Looking for a new imaging dataset for your project? Checkout this curated dataset containing histology images from five organs for functional tissue unit segmentation on Kaggle Dataset: www.kaggle.com/datasets/yas...
www.linkedin.com/in/yashvardh...
@katyborner.bsky.social #HuBMAP
9PM-Multiscale Models youtu.be/ysEYj0TA9l4?... Filipi N. Silva talks about interactive real-time visualizations of large-scale networks and embeddings using Helios-Web. Moderator: @katyborner.bsky.social Katy Börner, Indiana University #MultiscleHuman #humanreferenceatlas #CIFAR #HuBMAP #Helios-Web
Hour5 (4PM)–Collective Intelligence of the Body
Moderator: @katyborner.bsky.social
Speaker: @drmichaellevin.bsky.social
Michael Levin youtube.com/watch?v=hsBA... More: humanatlas.io/events/2024-... #MultiscaleHuman #HumanReferenceAtlas #Biomedicine #Morphogenesis #Cells #Hubmap #NIH
CNS Demo Day! The CNS Team is growing and looking for more, check out our page cns.iu.edu to find jobs, our publications, videos and more. @katyborner.bsky.social @bherr2.bsky.social #CNS #Datavisualization #HumanReferenceAtlas #HuBMAP #CIFAR #jointheteam
I had never heard of this before today. This is amazing 🤯 #science #scienceiscool #HuBMAP