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151 - Deacon part 1 In this Software Deep Dive episode, we talk with Dr. Bede Constantinides (University of Birmingham) about Deacon, a tool for removing host DNA reads from metagenomic datasets. We discuss why host read

So cool to hear my colleagues mentioned on my fav podcast 😎

This episode of the #MicroBinfie Podcast on tools for host DNA removal mentions the massive contributions from Sofia Stamouli, Lili Andersson-Li & others (incl Lauri Mesilaakso_, on the #TaxProfiler pipeline!
soundcloud.com/microbinfie/...

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151 - Deacon part 1 In this Software Deep Dive episode, we talk with Dr. Bede Constantinides (University of Birmingham) about Deacon, a tool for removing host DNA reads from metagenomic datasets. We discuss why host read

Host read removal sounds simple. It's not. 🧫

Ep. 151 of #microbinfie: we talk with @bede.im about Deacon — why alignment-based approaches fall short, the sensitivity/specificity tradeoff, and what it takes to remove host reads at scale. Part 1 of 2.

#metagenomics
on.soundcloud.com/gEm7QyaTauvd...

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If you work in genomics and haven't thought about vibe coding yet — episode 150 is your wake-up call. #microbinfie #genomicx

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150 - Genomicx In this episode, Lee, Nabil, and Andrew experiment with “vibe coding” bioinformatics tools using AI coding assistants. The goal: quickly build useful genomics utilities that run entirely in the…

🤯 y'all... I have been on the edge of my seat waiting to show you this episode. Not only is it the 150th episode of #microbinfie but we show you some pretty outrageous vibe coding. 🫨

Let us know what you think with #microbinfie #genomicx

pca.st/episode/3784...

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We just uploaded the 150th episode of the #microbinfie podcast, scheduled for Thursday, where we blow your mind with vibe coding. I can't believe we have actually made it this far.

🍻 To the next 150 episodes 🥂

https://soundcloud.com/microbinfie

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We just uploaded the 150th episode of the #microbinfie podcast, scheduled for Thursday, where we blow your mind with vibe coding. I can't believe we have actually made it this far.

🍻 To the next 150 episodes 🥂

@happykhan.mstdn.science.ap.brid.gy @andrewjpage.bsky.social

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146 - NextFlow debate 1 Play 146 - NextFlow debate 1 by Micro Binfie Podcast on desktop and mobile. Play over 320 million tracks for free on SoundCloud.

🍏 We just finished a three part debate on @nextflow.io! Please don't hate me for volunteering on the cons side of the debate! Subscribe to #microbinfie on the podcast app of your choice or go here m.soundcloud.com/microbinfie/...

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Original post on mstdn.science

Just dropped: #MicroBinfie Pathoplexus Part 1!

Join Lee & guest Clint (and me) as we deep-dive with Emma Hodcroft, Theo Sanderson & Arthur Shem Kasambula about Pathoplexus […]

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144 - micro binfie Pathoplexus part 1

🎙️ Just dropped: #MicroBinfie Pathoplexus Part 1!
Join @happykhan.mstdn.science.ap.brid.gy, Lee & guest Clint as they deep-dive with @firefoxx66.bsky.social, Theo Sanderson & Arthur Shem Kasambula into Pathoplexus.
Ready for a journey? 🚀 Listen now: pca.st/episode/c1f8...

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I love your feedback for the podcast but maybe this one is one of the best

#microbinfie

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@happykhan.mstdn.science.ap.brid.gy and I had a great time recording last week with @firefoxx66.bsky.social @theo.io and Arthur Shem, with the help of Clint. Episodes set to be released starting September 11.

#microbinfie

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Just finished another recording with @andrewjpage.bsky.social and @happykhan.mstdn.science.ap.brid.gy ! Trying to get back into the #microbinfie habit. Search for Micro Binfie wherever you get podcasts.

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sandbox.bio - Interactive bioinformatics tutorials

Wow, sandbox.bio now provides a tutorial for viral phylogenetics that you can run right in your browser 🙌
sandbox.bio/tutorials/vi...
#microbinfie #bioinformatics #training
via @robert.bio

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Y'all it's my fault (and a whole host of other factors I won't get into) that we haven't had #microbinfie episodes but I finally pushed out some episodes we had in the queue! Starting tomorrow, we'll start releasing the three "lost episodes" - the ones we recorded before 2025.

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With over 300 new followers in a matter of days I feel like I should introduce myself to the #microbinfie community! Hi, I’m Inês, and I’m a massive dork about public health 😷 and metagenomics 💩! Fun fact: I collect rubber ducks 🦆 and fridge magnets. #whoareyou?

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