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Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic. #SomaticVariants #ShortReads #LongReads #VariantCalling #Genomics #Bioinformatics #ToolsBenchmarking #ReferenceDatasets @natbiotech.nature.com ๐Ÿงฌ ๐Ÿ–ฅ๏ธ
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Preview
Practical Somatic Variant Analysis in Cancer Genomics 27-29 April 2026

๐Ÿš€ Learn somatic variant analysis in cancer genomics! Hands-on online workshop: QC, GATK4 Mutect2, R & VEP annotation. Go from raw data to actionable insights. ๐Ÿงฌ๐Ÿ“Š27-29 April 2026

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#CancerGenomics #SomaticVariants #Bioinformatics #PrecisionOncology #RStats

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A recurrent sequencing artifact on Illumina sequencers with two-color fluorescent dye chemistry and its impact on somatic variant detection. #ShortRead #Sequencing #TwoColorSequencing #SomaticVariants @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...

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Source:
https://www.biorxiv.org/content/10.1101/2024.12.02.625685v1.full.pdf

Source: https://www.biorxiv.org/content/10.1101/2024.12.02.625685v1.full.pdf

A robust benchmark for detecting low-frequency variants in the HG002 Genome In A Bottle NIST reference material. #LowFrequencyVariants #SomaticMosaicism #SomaticVariants #VariantCalling #ReferenceMaterials #GiAB #Benchmarking #Genomics ๐Ÿงฌ ๐Ÿ–ฅ๏ธ @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...

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