preprint: biorxiv.org/content/10.6...

code: github.com/zhengxinchan...

#Genomics #Bioinformatics #LongRead #RNAseq #population_scale #Isoform

Graphical abstract from the described paper

📊 In her new paper, PhD student Ghalia Rehawi combined total gene expression and isoform ratio data using a network approach, showing significant rewiring of #gene and #isoform co-expression patterns in the network of affected vs. unaffected individuals.

🎉 Full paper: www.cell.com/iscience/ful...

Quantification of transcript isoforms at the single-cell level using SCALPEL - Nature Communications Single-cell RNA-seq facilitates the study of transcriptome diversity in individual cells. Here, authors introduce a tool for isoform quantification at the single-cell level using 3’ scRNA-seq data, co...

A computational tool #SCALPEL for #isoform quantification at the single-cell level using 3’ scRNA-seq data @franzake.bsky.social @mireyaplass.bsky.social #BiotechNatureComms

doi.org/10.1038/s414...