Oh, I think I will start throwing this at people. Incoming 🏹
Posts by Marie Held
Have you thrown any of the resources at them that I’ve thrown at you?
🐍 Learn Python for Image Analysis — for free!
UK life scientists: join EuroBioImaging's hands-on beginner course at The Crick in London (23–25 June), running simultaneously with sites in CZ, PT and SWE!
⏰ Register by 15 April — places are limited!
✈️ Travel funding may be available
shorturl.at/v3Vsk
🙌 Over 100 people at the #EuroBioImgaing Image Data Community Days! Join us this week for lectures, hands-on workshops & networking sessions. Now, Aastha Mathur tells about our Image Data Services - Analysis & Beyond.
#ImagingCommunity
More info⤵️
www.eurobioimaging.eu/events/image...
Happening now! We are kicking off the Image Data Community Days - a full week of online workshops & events. Hope you can join us to talk about image data topics! #ImagingCommunity
Register & more info⤵️
www.eurobioimaging.eu/events/image...
⏱️ Starting soon! #EuroBioImaging's Image Data Community Days event takes place online this week. Don't miss the first session starting at 🕒️ 9 am CEST TODAY to learn more about our Data Services!
www.eurobioimaging.eu/events/image...
Stick figure sittin at a desk with a monitor, mouse and key board, wearing headphones with a microphone. Handwritten title: Schroedinger's Marie: She's here and not - week-long online conference.
Attending Euro BioImaging's Image Data Community Days (www.eurobioimaging.eu/events/image...) this week. Also running a workshop. So it's Schroedinger's Marie in the office this week.
Explore image data analysis the FAIR way with @galaxyproject.bsky.social ! Join us April 16 🕒️ 15:00–17:00 CEST for a hands‑on introduction to web‑based, HPC‑ready workflows.
#Galaxy #ImageAnalysis #FAIRdata #BioImaging #Workshop 🌌
us02web.zoom.us/meeting/regi...
Analyse public OME‑Zarr images using models from the BioImage Model Zoo! 🦒 Join us April 16 🕐️ 13:00–15:00 CEST — a perfect fit for Python 🐍 users ready for hands‑on work. @ai4life.bsky.social
#OMEZarr #AIinScience #ImageAnalysis #Workshop
forms.gle/5hQh1BoACPaF...
🚨🔬🚨🔬🚨
We are pleased to announce that registration for the 7th edition of the Crick BioImage Analysis Symposium #CBIAS 2026 is now open!
🕐November 23rd-24th, 2026📍The Francis Crick Institute, London. We look forward to seeing as many of you as possible there (or online 😀)
⏳️ Have you registered yet? #EuroBioImaging's Image Data Community Days event is happening next week. If you're curious about biological & preclinical #imagedata analysis, management, tools & more this event is for you.
Registration is FREE & open to all⤵️
www.eurobioimaging.eu/events/image...
Discover Fileglancer and explore OME‑Zarr datasets with seamless browsing and visualization ! Join us April 14 (16:00–17:00 CEST) and learn how to use it in your workflow. @hhmi-science.bsky.social
#OMEZarr #BioImaging #Workshop
hhmi.zoom.us/meeting/regi...
Still a few open spots! Join us April 13 & 14 🕒️ 15:00–17:00 CEST to learn how to make your microscopy research more FAIR & reproducible. Great for students, postdocs, and PIs. @makaefer.bsky.social
#FAIRdata #BioImaging #Reproducibility
docs.google.com/forms/d/e/1F...
A spaxel (spatial pixel) is the smallest spatial element in an integral field spectroscopy dataset, representing a specific position on the sky with an associated spectrum.
I knew about pixels and voxels but was today introduced to spaxels: A spaxel (spatial pixel) is the smallest spatial element in an integral field spectroscopy dataset, representing a specific position on the sky with an associated spectrum. Taken from Maggie Aderin-Pocock‘s book WEBB‘S UNIVERSE
Sand dune detail of sand streaks behind bits of shells
Golden, sunny beach with blue sky, some clouds and a blustery shore line
Muscle shells in wavy wet sand.
Sea birds taking flight over the sea with gentle waves, mostly cloudy sky with a few blue streaks.
The calm after the storm is the calm before the storm
3D printed tube tracks. In fact a lot of 3D printer + thingyverse combos…
Want to learn #Python for #ImageAnalysis? 🐍 Supported by the #EVOLVEproject, four #EuroBioImaging Nodes are offering a distributed training course for beginners on Python - it's free! Join the course in 4 in person locations - 🇬🇧 🇵🇹 🇨🇿 🇸🇪
Apply before April 15⤵️
www.eurobioimaging.eu/events/evolv...
I like the Descriptor-based registration (3d + t) by Stephan Preibisch for this kind of job. Ships with Fiji, under Plugins > Registration
Unspecific binding of secondary antibody aggregates 😬
𝗘𝘅𝗰𝗶𝘁𝗶𝗻𝗴 𝗗𝗲𝘃𝗲𝗹𝗼𝗽𝗺𝗲𝗻𝘁𝘀 𝗶𝗻 𝗠𝗶𝗰𝗿𝗼𝘀𝗰𝗼𝗽𝘆 𝗥𝗲𝗽𝗼𝗿𝘁𝗶𝗻𝗴! If you're involved in creating, processing, or publishing microscopy data, take a look at the new checklist for reporting requirements provided by @quarep-limi.bsky.social in @jcb.org 🔗 rupress.org/jcb/article/...
Woohoo! So looking forward to the next iteration. 🤩
Get in touch if you want to be paid to work with us this summer. We are particularly interested in hearing from scientists who are interested in software development!
📣 Registration for the #EuroBioImaging Image Data Community Days is open! Join us for online event centered on bioimaging & preclinical imaging data.
🗓️ April 13-17, online
All are welcome!
Register here ⤵️
www.eurobioimaging.eu/events/image...
Bloodstream-associated Salmonella Typhimurium and Enteritidis iNTS pathovariants hyper-replicate in human macrophages www.biorxiv.org/content/10.64898/2026.01...
Please see below. York is one of these sites, enabling everything from the basics to some of the most advanced microscopy applications
Two pieces of plaited, well baked garlic bread with cheese.
Sometimes there’s only one thing that hits the spot: homemade cheesy garlic bread.
We are hosting an #Ilastik workshop on March 27th, led by Dominik Kutra, senior research software engineer @ilastik-team.bsky.social
The course is open to students and staff at @crick.ac.uk and partner universities (@ucl.ac.uk, @kingscollegelondon.bsky.social and @imperialcollegeldn.bsky.social)
We Are hiring!! 👨💻👩💻 CALM's new Data and Systems Steward Role is live 🎉crick.wd3.myworkdayjobs.com/External/job/London/Data... closing date 8th Feb!
<25% of #data professionals are women - not great!
If you are a woman interested in retraining in #bio #DataScience, our #IWD #Scholarship may be for you. This award gives you access to all our courses, peer-to-peer support & mentorship. Deadline: 20/02.
www.liverpool.ac.uk/computationa...