1/ Excited to share our preprint! 🥳
Degradation of aromatic compounds, including BTEX pollutants, requires highly endergonic aromatic ring reduction. Using #cryoEM and in situ #cryoET, we show how BCRII couples electron bifurcation modules in one giant redox machine
www.biorxiv.org/content/10.6...
Posts by Fidel Ramírez-Amador
How do “LEGO-like” electron-bifurcating modules combine to drive degradation in BTEX-contaminated ecosystems?
Check out our latest preprint, where we use cryo-EM and cryo-ET to reveal how the 1 MDa BCRII complex powers extremely endergonic aromatic ring reduction.
www.biorxiv.org/content/10.6...
Excited to share our new paper in @natcomms.nature.com !
Here, we present the cryo-EM structure of the Cytc₆:PSI complex from Chlamydomonas reinhardtii👇
www.nature.com/articles/s41...
I am truly honoured and delighted to receive the GBM #PhDAward from @gbmev.bsky.social
Grateful to @schullerjm.bsky.social and Prof. Volker Müller for their continuous support and guidance!
www.uni-marburg.de/en/prfolder-...
Carbonic anhydrase catalyses the interconversion of CO2 and HCO3- and helps increasing the net-CO2 concentration inside cells. Why? CO2-reducing enzymes like RuBisCO are notoriously slow and ineffective. However, import of HCO3- is typically coupled to ATP consumption...
Genus-specific remodeling of carbon and energy metabolism facilitates acetoclastic methanogenesis in Methanosarcina spp. and Methanothrix spp.
#methanogens #methane #archaea #MicroSky #ArchaeaSky
@asm.org
journals.asm.org/doi/full/10....
🚨 New pre-print alert!
Jumbo circular extrachromosomal elements of methane-oxidizing archaea with variably extensive metabolic and defense gene repertoires
www.biorxiv.org/content/10.6...
Molecular evolution of the Wood-Ljungdahl pathway and the reductive glycine pathway in Desulfobacterota www.frontiersin.org/journals/mic... #jcampubs
Out of the lab, words cannot express the impact that @ekaterinajalomo.bsky.social, my (now growing) family and friends from Marburg and Mexico have had along the road! To everyone who was part of it, thanks!
Also grateful to each one of my thesis committee members @stripplab.bsky.social, @georghochberg.bsky.social, @olallalab.bsky.social, and @rebeleinlab.bsky.social for being a key part of this process.
Last Friday was the defense of my PhD thesis entitled "Structural basis of anaerobic enzymes mediated by noncanonical metalloclusters" after 4 yrs at the @synmikro.bsky.social 🎓🎓
Big thanks to my supervisor @schullerjm.bsky.social and the whole Schuller lab for their continuous and massive support!
Nice trip and looking forward to see you soon Sven! 🤘🏻
Nickel: Geochemistry, biochemistry and its role in chemical and biological evolutions
www.sciencedirect.com/science/arti...
Carbon-monoxide-driven bioethanol production operates through a tungsten-dependent catalyst
#BioEthanol #CarbonMonoxide
www.nature.com/articles/s41...
Our latest work on the nitrogenase-like methylthio-alkane reductase, which specifically reduces reduces carbon-sulfide bonds is now out @natcatal.nature.com: doi.org/10.1038/s419.... We find for the first time large #nitrogenase metalloclusters (P- and L-cluster) outside nitrogenases.
Happy to share our latest review article, this time joining forces with 📌Seigo Shima, 📌James Birrell, 📌Giorgio Caserta, and 📌Oli Lenz. We wrote about hydrogenase catalysis because this is what we do best 😎
doi.org/10.1002/9783...
#Methanosarcina acetivorans requires methanol:coenzyme M methyltransferases for #ethane formation from ethanol #methane
link.springer.com/article/10.1...
New frontiers in short-chain alkyl-coenzyme M reductases
#methanogenesis #methane #microbiology
www.sciencedirect.com/science/arti...
Carbon monoxide metabolism in freshwater anaerobic methanotrophic archaea www.biorxiv.org/content/10.1101/2025.09....
Atomic resolution structures of the methane-activating enzyme in anaerobic methanotrophy reveal extensive post-translational modifications
#microbiology #methane #archaea
@natcomms.nature.com
www.nature.com/articles/s41...
Fantastic review on methodological developments in protein structural phylogenetics
academic.oup.com/gbe/article/...
Stepwise and reversible assembly of [2Fe–2S] rhombs to [8Fe–8S] clusters (Mougel et al. via @natchem.nature.com)
www.nature.com/articles/s41...
1/3 Electricity from air! In the top journal Nano Energy today, we report the first fuel cell that makes power from air alone. We achieved this by using the enzyme Huc to oxidize ambient hydrogen. This results in a continuous low-level power from air and higher outputs with industrial waste gases.
Metal ions are universally required for life, and many of the foundational principles of metal homeostasis have emerged from studies of microbial systems. In this review, I provide a introductory overview targeted to those new to the field.
#MicroSky #Metals
rdcu.be/eycU2
Our new study shows how nickel limitation changes electron flow in methanogens.
@nature.com
#methanogens #methane #archaea
www.nature.com/articles/s41...
New paper from the lab from Sriram Garg in my group. We introduce a general substitution matrix for structural phylogenetics. I think this is a big deal, so read on below if you think deep history is important. academic.oup.com/mbe/advance-...
Proud to present the lab's latest work. The full structure of the sodium translocating methyltransferase (Mtr) bound to a small oxygen-responsive small protein MtrI. Work by Tristan and together with @schmitzstreitslab.bsky.social .
www.biorxiv.org/content/10.1101/2025.06.02.657420v1