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Posts by Vishank Jain-Sharma

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📢Preprint: Positional information (PI) and information flows in dynamic tissues.
Our mathematical framework quantifies, from data, how the coupled stochastic dynamics of cell positions and properties preserve, degrade and generate PI. @alex-plum.bsky.social www.biorxiv.org/content/10.6...

1 day ago 42 14 0 0
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Congratulations to UC Santa Barbara's David Gross, who just won the 2026 Special Breakthrough Prize in Fundamental Physics, for a lifetime of groundbreaking contributions to theoretical physics—from the strong force to string theory.

Full story: https://ow.ly/ZzyO50YMjzv

3 days ago 14 7 0 0
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Our latest work on shape-programmable tissues is out in @science.org. By positioning topological defects in cellular nematics, we encode frustrated 2D force fields that relax into predictable 3D shapes. Collaboration with Marino Arroyo’s lab, led by @pauguillamat.bsky.social at @ibecbarcelona.eu.

5 days ago 176 64 7 4
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Temperature affects all biological rates, but how do we model its effects? Our 2-part review brings together modeling approaches from empirical curve fits to microscopic kinetics to network-level dynamics 🧵
Part I: doi.org/10.1016/j.coisb.2026.100577
Part II: doi.org/10.1016/j.coisb.2026.100578

5 days ago 10 2 1 2
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For scaling-laws aficionados (I am one), here are the graphs showing power-law behavior for vasculature for embryos (macaque, mouse, turtle).

This means that the vasculature of developing embryos is scale free fractal.

More here: www.biorxiv.org/content/10.6...

1 week ago 22 6 1 0
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New funding to explore how embryos survive temperature stress in the era of climate change | EMBL An international team coordinated by Vikas Trivedi at EMBL Barcelona has been awarded an HFSP grant worth $1.5 million (€1.3 M) to study how developing organisms stay on track despite climate-driven t...

Congratulations to Vikas Trivedi & collaborators for being awarded the HFSP grant!

An international team coordinated by EMBL Barcelona researchers has been awarded $1.5M to study how developing organisms stay on track despite climate-driven temperature instability.

www.embl.org/news/awards-...

1 week ago 20 5 1 0
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An independent arXiv I'm a bit late passing this news on, but a few weeks ago arXiv announced that from 1st July 2026 it will be establishing itself as an "independent nonprofit organization". It has been hosted for many years by Cornell University. You can read here about the reasons for this and how it will work, and there is a lengthier article in…

An independent arXiv

I'm a bit late passing this news on, but a few weeks ago arXiv announced that from 1st July 2026 it will be establishing itself as an "independent nonprofit organization". It has been hosted for many years by Cornell University. You can read here about the reasons for this and…

1 week ago 27 13 0 1

Now #published @physreve.bsky.social: "Elasticity and plasticity of epithelial gap closure"

doi.org/10.1103/qtcv-gk3y

#PhD work of Maryam Setoudeh, a model of cell intercalations during epiboly as elastoplastic deformations of a surface.

@mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social

2 weeks ago 19 7 0 0
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How do pairs of DNA loci - such as enhancers and promoters - find each other inside the nucleus? 🤔

Most models assume the random forces driving locus motion are independent in space

New preprint by
@janniharju.bsky.social: this assumption fails in living cells 🧵

www.biorxiv.org/content/10.6...

1 month ago 113 46 3 1
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Here are some cute little wild zebrafish that we found in Nepal!
🧪🐟

1 month ago 58 8 0 0
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Glob-glob! Absolutely magical sea anemone larva (about 7 mm) from The Lombok Strait, Indonesia 🇮🇩

1 month ago 1094 324 14 23
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First 24 hours of embryonic development in 9 different animal species: (From left to right) Zebrafish, Sea urchin, Black widow spider, Tardigrade, Sea squirt, Comb jelly, Parchment tube worm, Roundworm, Slipper snail. Credit to @tessamontague.bsky.social & Zuzka Vavrušová. #ZebrafishZunday #devbio 🧪

1 month ago 251 70 4 9
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RNA-specific local translation is patterned by condensates for multinucleate cell growth - Nature Cell Biology Geisterfer, Jalihal et al. show spatially distinct effects of Whi3 condensates on target translation in Ashbya syncytia. In vitro, translation is enriched at condensate–solute interfaces but repressed...

Condensates are powerful ways to break symmetry and cells do remarkable things with them. Here we show that in a multinucleate fungus, a condensate regulates translation of a cyclin and a formin in distinct locations.
www.nature.com/articles/s41...

1 month ago 110 43 1 0
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Gene regulatory networks: from correlative models to causal explanations Nature Reviews Genetics - In this Perspective, Maizels and Briscoe discuss the limitations of current models of gene regulatory networks and outline solutions to harness data abundance without...

New Perspective form Rory Maizels & me: "Gene regulatory networks: from correlative models to causal explanations"

Gene regulatory networks are supposed to give us mechanistic explanations of development, so why are we drowning in 'hairballs' of statistical correlations?

rdcu.be/e7zx7

1 month ago 122 46 2 2

Final version @nature.com of our paper describing unconventional multicellular development in a choanoflagellate inhabiting an extreme environment. A ton of new data since the first @biorxivpreprint.bsky.social preprint (which we've kept updating).

A brief 🧵 (carried over from the old place)

1 month ago 380 152 16 15
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Wild-caught zebrafish in Nepal 🦓🐟

2 months ago 36 8 3 1
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We summarised the many roles of material phase transitions in development (and they are not just mechanical 🤔)

2 months ago 31 9 0 0
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Mutual information and task-relevant latent dimensionality Estimating the dimensionality of the latent representation needed for prediction -- the task-relevant dimension -- is a difficult, largely unsolved problem with broad scientific applications. We cast ...

New preprint!
arxiv.org/abs/2602.08105

We use mutual information to find the shared dimensionality of shared latent space between two high-dimensional variables. Turning inference into optimization, we use it to figure out dofs in movies and critical scaling in Ising!

2 months ago 6 3 1 0
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Advanced grad students + postdocs: apply for the 2026 #kitpqbio summer course, "Physical Principles of Morphogenesis in Plants and Animals," at buff.ly/OXXMKEv. Apply by Feb. 1.
Course directors Adrienne Roeder (Cornell) and Sebastian Streichan (UCSB)

5 months ago 36 26 0 4

Instructors include @akankshi.bsky.social, @nicolettapetridou.bsky.social, @dianapinheiro.bsky.social, @chloeroffay.bsky.social, & @streichan.bsky.social among others! 🐟

2 months ago 4 2 0 0

Seconded. If anything, it has never been a better time to be a biophysicist, a complex system physicists, etc…. And it is a bit sad that much of it now happens *outside* of physics departments (for good and bad reasons…)

2 months ago 10 5 1 0
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Really excited to share our new paper in @nature.com! We uncovered how a physical instability of the cytoplasm coupled with the cell cycle drives cytoplasmic partitioning in early embryos #zebrafish #drosophila. Read more in this🧵 www.nature.com/articles/s41... 🤩
@poldresden.bsky.social @mpi-cbg.de

2 months ago 209 69 4 10
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Next Monday 26th Jan, we are very excited to hear two talks from Margot Smit @likeyoda1.bsky.social and Susan Wopat @suewop.bsky.social!
Visit our website(ucammorphogenesisseries.com) for more details, and be sure to subscribe to our mailing list(lists.cam.ac.uk/sympa/info/u...). See you soon!!

2 months ago 4 3 0 1

Looking forward to sharing my postdoctoral work in just a little over a week at the UCAM Morphogenesis Series! 🐟🔬🔦

3 months ago 9 6 0 1
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The Cambridge Morphogenesis Seminar Series is back! 🎉
Check out the flyer for a great lineup of speakers for Lent Term 2026!
Don't forget to subscribe to our mailing list to get all the information, including the Zoom link. We are excited to see you again soon 👋

3 months ago 15 8 1 2
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Feb 1 deadline approaching for our @kitp-ucsb.bsky.social QBio summer course on Physical Principles of Morphogenesis in Plants and Animals. @streichan.bsky.social
@maurazimmermann.bsky.social @maizel-lab.org @yusuke-mori.bsky.social @akankshi.bsky.social @nicolettapetridou.bsky.social

3 months ago 25 20 1 1
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How does a uniform zygote reliably break symmetry?
How do initially identical cells diverge in cell-cycle timing and transcriptional state?

In our new paper in Nature Physics, we show that embryo geometry itself is sufficient to pattern early development.

www.nature.com/articles/s41...

3 months ago 17 4 2 3
A screenshot of the 'The hard truth about how hard it is to publish in Development' article PDF.

A screenshot of the 'The hard truth about how hard it is to publish in Development' article PDF.

The hard truth about how hard it is to publish in Development

Editor-in-Chief @jamesbriscoe.bsky.social leads our team of Academic Editors in addressing the perception that Development is ‘too hard to publish in’ by discussing the journal's review process.

doi.org/10.1242/dev....

3 months ago 16 9 0 2
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Open-source atlas of fruit fly development DynamicAtlas is a high-res framework for morphological studies

📹 M. F. Lefebvre, V. Jain-Sharma, N. Claussen & N. P. Mitchell et al @streichan.bsky.social lab University of California Santa Barbara in @natmethods.nature.com
➡️ bpod.org.uk/archive/2026...

3 months ago 7 5 0 1
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Why does life explore so few of the forms it could possibly take? Using fractal descriptors, this #scienceadvances paper shows that Earth’s biosphere clusters around simple shapes, reflecting deep evolutionary constraints. @artemyte.bsky.social @manlius.bsky.social www.science.org/doi/pdf/10.1...

3 months ago 229 76 5 6