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Posts by Ellis Patrick

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ARC Postgraduate Research Scholarship A $40,109 per annum stipend scholarship for research students within the Faculty of Science.

๐ŸŽ“ PhD scholarship

We are recruiting a PhD student to develop new methods for analysing spatial omics data at the University of Sydney, cosupervised by @shazanfar.bsky.social and me. Ideal for students with backgrounds in statistics, data science, computer science or bioinformatics

Apply by 18 Jan

4 months ago 9 8 0 0

Thanks mate!

6 months ago 0 0 0 0
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Iโ€™m really chuffed to have been awarded the SUPRA Supervisor of the Year 2025 for the Faculty of Science. Big thanks to my students for nominating me! Your energy, curiosity and drive make supervision the most rewarding part of my role :)

6 months ago 8 0 1 0
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pasta: Pattern Analysis for Spatial Omics Data Spatial omics assays allow for the molecular characterisation of cells in their spatial context. Notably, the two main technological streams, imaging-based and high-throughput sequencing-based, can gi...

Interested in spatial statistics for spatial omics data? Check out our new resource: pasta.

We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!

arxiv.org/abs/2412.01561

1 year ago 18 7 1 1

I'm feeling pretty excited to have a month off over xmas relaxing at the beach.

I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(

1 year ago 4 0 2 0
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PhD scholarship in bioinformatics - Flinders University

Reupping this since the explosion in members here.

Iโ€™m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details ๐Ÿ‘‡ Please share ๐Ÿ˜

www.flinders.edu.au/scholarships...

1 year ago 36 44 0 0
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Kicking off our Bluesky life by announcing our Statistical Bioinformatics Seminar Judith & David Coffey Invited Speaker. Mon 25/11 Professor Stephen Leslie, Indigenous Australian genomes show deep population structure and abundant novel variation. Online and @ USyd spds.sydney.edu.au/event/specia...

1 year ago 3 2 0 0
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Amazing #BiocAsia2024 event! Thanks to all who participated!
Looking forward to next year!
@bioconductor.bsky.social

1 year ago 12 3 0 1

Had such a great time at EuroBioC2024, awesome talks and met some amazing people! Definitely keeping an eye on #EuroBioC2025!

@bioconductor.bsky.social #Bioconductor #Bioinformatics

1 year ago 11 2 0 0
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Ellis' learning of the day. The base R pipe has a placeholder!

link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"

1 year ago 1 0 0 0

Cool sticker!

1 year ago 1 0 0 0

Academic writing โ€” get utilized to it.

1 year ago 344 74 11 8

Pro-tip for anyone that attended COMBINE yesterday... You can make your name tag double-sided by slotting your COMBINE name tag into the ABACBS name tag. Saves the awkward flick of the name tag when you introduce yourself to someone new! #abacbs23 #abacbs2023

2 years ago 1 0 0 0

Good morning Brisbane! #ABACBS23 #ABACBS2023

2 years ago 9 0 0 0

Bioinformatics wisdom of the day:
When there are too many methods for the same task, you know that none of them is very good.

2 years ago 20 3 0 0