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Posts by Sunandan Mukherjee

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Would you like to find out more about the opportunities for research visits to the University of Edinburgh as part of the RACE project (RNA and Cell Biology – From Fundamental Research to Therapies)?

Read the blog by Dr. Sunandan Mukherjee, a researcher at IIMCB! - bit.ly/3NYDaLi

2 weeks ago 3 2 0 0

I’m incredibly honored to share that I’ve received a Marie Skłodowska-Curie Postdoctoral Fellowship (MSCA-PF) to conduct research at the Københavns Universitet - University of Copenhagen and Stockholm University.

"𝙖𝙣𝙮𝙩𝙝𝙞𝙣𝙜'𝙨 𝙥𝙤𝙨𝙨𝙞𝙗𝙡𝙚"

#MSCA #UCPH #StockholmUniversity #IIMCB

2 months ago 3 0 0 0
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Unlocking the regulatory code of RNA: launching the Human RNome Project - Genome Biology The human RNome, the complete set of RNA molecules in human cells, arises through complex processing and includes diverse molecular species. While research traditionally focuses on four canonical nucl...

Exciting news for the RNA research community!

The Human RNome Project has been launched: a global effort to map all human RNAs and their chemical modifications. Proud to support it and contribute to the article in Genome Biology doi.org/10.1186/s130...
#RNA #bioinformatics #RNAstructure #modomics

5 months ago 48 16 0 3
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Science, Stories and Stone: My Research Journey in Edinburgh – Institute of Genetics and Cancer A blog for our community to write about their interests and to share their stories.

"...research isn’t just about data and discoveries; it’s about people, perspectives, and the places that inspire us."
@sunandan.bsky.social from @iimcb.bsky.social has written about his experience of visiting Edinburgh and #IGC for a two-week research visit 👉

6 months ago 1 1 0 0

In our new review, we dive into the latest breakthroughs in modeling RNA and RNA–protein complexes: from deep learning and molecular simulations to hybrid AI–physics methods and even quantum approaches. 🧬

👉 Open access: www.sciencedirect.com/science/arti...

#RNA #MolecularModeling #AI

8 months ago 3 1 1 0
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Knowing when to fold ’em - Nature Methods A steadily growing toolbox of techniques is helping researchers to understand the structural complexity that enables RNA molecules to perform a dizzying array of functions in the cell.

The most comprehensive testament of the current trends of RNA structural biology:
doi.org/10.1038/s415...

10 months ago 1 0 0 0

Proud to be part of this interdisciplinary work with @sebastianglatt.bsky.social, Ting-Yu Lin, our teams at @MCB_UJ & @IIMCB_Warsaw, and collaborators from France! #cryoEM + #biophysics + #modeling reveal how #pseudouridine shapes human tRNA structure and stability. 🧬 #RNAmodifications

11 months ago 5 1 0 0

Delighted to be a part of this wonderful collaborative work!
#tRNA #PSU #cryoEM

11 months ago 3 0 0 0
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May this festive season bring you good health, success, and countless blessings. 🌟 Take time to reflect and find peace in the little moments. Here’s to joy, love, and togetherness!

Merry Christmas and Happy holidays! ❤️✨

#FestiveSeason #GoodHealth #Blessings

1 year ago 2 0 0 0
Download UCSF ChimeraX

ChimeraX 1.9 has been released! Session view can now be automatically saved and restored. New ​'Find Cavities' tool identifying pockets in models. www.rbvi.ucsf.edu/chimerax/dow...

1 year ago 55 9 1 1

Sounds promising!

1 year ago 0 0 0 0

We are not yet there to predict the large #RNA molecules unless the non-canonical contacts are detected more accurately!
#CASP16

1 year ago 2 0 0 0

Congratulations @nithinaneesh.bsky.social

1 year ago 1 0 1 0
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RNA-Puzzles Round V: blind predictions of 23 RNA structures - Nature Methods The results of the Fifth RNA-Puzzles contest highlights advances in RNA three-dimensional structure prediction and uncovers new insights into RNA folding and structure.

RNA-Puzzles Round V paper is out:
www.nature.com/articles/s41...
It reports the evaluation of blind prediction of 23 targets predicted by 18 groups worldwide. I'm glad that our group ranked as one of the top four groups in this competition!

#RNA #prediction #RNApuzzles #CASP16

1 year ago 9 3 0 0

Excited to share our recently published review on #RNA structure prediction and modeling tools! 🧬 We reported advances using both theoretical approaches and experimental data. Free access available until Nov 13, 2024!👇

👉 authors.elsevier.com/a/1jpyq3SNvcAc…

#RNA #StructuralBiology #Modeling

1 year ago 1 0 0 0
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Happy to share that I had the opportunity to present our method, #SimRNA_Cry, for modeling RNA structures using #CryoEM data at the Computational Approach to RNA Structure and Function conference in #Benasque, Spain!

PC: Nithin C and Eugene Baulin

1 year ago 1 0 0 0
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Happy to share our new publication on the discovery of the first ever genuine knot in a natural RNA molecules.
Full article: doi.org/10.1016/j.jm...

2 years ago 1 1 0 0
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Demise of Ustad Rashid Khan is a great loss for Indian Classical Music! May his soul rest in peace!

2 years ago 4 0 0 0