Advertisement · 728 × 90

Posts by Pablo Ivan Nikel

Preview
Pseudomonas vancouverensis as a platform for one-carbon (C1) assimilation and polyhydroxyalkanoate accumulation Metabolic engineering calls for new bacterial chassis that combine robust metabolic and physiological traits with genetic tractability. We developed P…

#Pseudomonas vancouverensis as a platform for one-carbon (#C1) assimilation and #polyhydroxyalkanoate accumulation, led by Emil C. Ørsted @labnikel.bsky.social

#Biotechnology #MetabolicEngineering #SynBio

www.sciencedirect.com/science/arti...

3 weeks ago 8 2 0 0
Preview
Accelerating enzyme discovery and engineering with high-throughput screening Covering: up to August 2024 Enzymes play an essential role in synthesizing value-added chemicals with high specificity and selectivity. Since enzymes utilize substrates derived from renewable…

🔓Check out the #OpenAccess review by @pabnik.bsky.social & co. @labnikel.bsky.social in our latest issue exploring emergent strategies and methods for isolating, creating & characterizing enzymes optimized for bioproduction #natprod

Read in full on our website🔽

1 month ago 3 4 0 0

💫 I am recruiting a postdoctoral candidate for a 3-year position starting in summer 2026 to work on the role of extracellular RNA (eRNA) in interspecies interactions.

1 month ago 3 9 1 0

Very sad news about the passing of Prof. Jeff Cole. Jeff was a central figure for biotechnology in Europe who inspired generations of researchers. R.I.P.🕊️

1 month ago 5 1 0 0

There was an interest a few years ago to establish a PseudoWiki, which unfortunately did not materialize. Other than the Tn5-insertion collection mentioned by @jjimenez.bsky.social, I don't know of any repository—but get in touch if we can help with our own collection!

2 months ago 1 0 1 0
Post image

#MicroSky: Plasmid vectors still underpin molecular biology, but convenience shouldn’t trump design. De Lorenzo & Martínez revisit copy number, selection & stability, and explores modular AI-assisted vector design for robust synthetic biology across the microbial world. doi.org/10.1111/1751...

2 months ago 16 6 0 1
Preview
The disputed identity of Pseudomonas putida KT2440: when taxonomists rename your favorite microbe | mBio Names matter; they are not mere labels. They operate as anchors of memory, social coordinates, and references of collective identity. When a name becomes established through long-term use and broad ad...

How do you react when your favorite microbe is renamed by taxonomists who are completely outside your field—and who ignore the community that actually works with it? Here is our clear answer re the case of Pseudomonas putida KT2440 👉🏻 journals.asm.org/doi/10.1128/...

2 months ago 33 14 2 3
Advertisement
Preview
The disputed identity of Pseudomonas putida KT2440: when taxonomists rename your favorite microbe | mBio Names matter; they are not mere labels. They operate as anchors of memory, social coordinates, and references of collective identity. When a name becomes established through long-term use and broad ad...

Should an iconic #bacterial #chassis be renamed without community consensus? Our @mbio.bsky.social #article vindicates the established identity of #Pseudomonas putida KT2440 & argues for continuity, community practice & common sense in naming · @vdlorenzo.bsky.social
journals.asm.org/doi/10.1128/...

2 months ago 17 6 1 1

this is also a contribution to the Scientists' Warning to Humanity series
@scientistswarning.bsky.social

4 months ago 0 1 0 1
Post image

Happy to post our latest paper:
doi.org/10.1111/1751...

Biases accumulate with age, so it is essential to begin teaching critical thinking as early as possible. The problems are HOW, given the complexity of its theory, and IN WHAT EDUCATIONAL CONTEXT? The solutions we propose in this paper are...

4 months ago 12 9 1 1
Preview
Microbes are life, the biological core of One Health and Health in All Policies The World Health Organization (WHO) is promoting the operative concept of “Health in All Policies” (HiAP; https://iris.who.int/bitstream/handle/10665/11263

Microbes determine the health of all other organisms and that of the planet. They were our ancestors and are our cousins. They are life and sustain it.

Microbes are life, the biological core of One Health and Health in All Policies url: academic.oup.com/microlife/ar...

4 months ago 2 2 0 0
Preview
LGBT+ History Month 2026 - LGBT+ History Month If you’d like to donate to support our work, click here to donate via PayPal. Free Schools Presentation For 2026 we are able to offer free LGBT+ History Month presentations for secondary schools, prid...

So excited that the theme of LGBT+ History Month UK 2026 is 'Science and Innovation,' with super badge designed by @canopyrobin.com! 🧬🏳️‍⚧️🔭🏳️‍🌈🚆

Wonderful launch event at the Royal Society of Chemistry @rsc.org this evening. 👏

lgbtplushistorymonth.co.uk/lgbt-history... @lgbthm.bsky.social #LGBTplusHM 🌈🗃️

5 months ago 41 12 2 0
Post image

Growth-coupled microbial biosynthesis of the animal pigment xanthommatin — Led by Leah Bushin, featuring M. Gracia Alvan, @danielvolke.bsky.social @oscarpuiggene.bsky.social in a fantastic collaboration w/Brad Moore @labnikel.bsky.social @natbiotech.nature.com 🦑
www.nature.com/articles/s41...

5 months ago 33 15 2 1
Preview
Synthetic C1 metabolism in Pseudomonas putida enables strict formatotrophy and methylotrophy via the reductive glycine pathway | mBio Soluble C1 feedstocks, such as formate and methanol, have gained attention as sustainable substrates for biotechnology, with the potential to reduce greenhouse gas emissions and reliance on sugar-based resources. Despite their promise, the metabolic ...

🚨 New paper in mBio!
We established strict formatotrophic & methylotrophic growth in engineered Pseudomonas putida via the reductive glycine pathway (rGlyP). journals.asm.org/doi/full/10....
Here’s a teaser of how we did it 🧵👇1/5

7 months ago 17 10 2 2
Post image

3/4 Our perspective lays out:
1️⃣ A blueprint for designing next-gen synthetic C1 microbes
2️⃣ A roadmap for engineering P. putida into an autotrophic chassis
3️⃣ A circular carbon economy vision, revalorizing CO₂ + waste streams
📊 Together, these steps connect design → engineering → sustainability.

6 months ago 1 1 1 0
Advertisement
Preview
A blueprint for designing the next-generation of synthetic C1 microbes - Nature Communications Synthetic one-carbon assimilation could contribute to a more sustainable and circular carbon economy, but much work in this field has focused on model microorganisms. Here the authors provide their perspective on the potential value of non-model microbes, and how that potential could be realised.

🚀 Thrilled to share our new Nature Communications article:
“A blueprint for designing the next-generation of synthetic C1 microbes”
We propose a framework to unlock sustainable, carbon-efficient biomanufacturing using non-canonical hosts.
🔗 www.nature.com/articles/s41... A short 🧵1/4

6 months ago 8 7 1 0
Preview
A blueprint for designing the next-generation of synthetic C1 microbes - Nature Communications Synthetic one-carbon assimilation could contribute to a more sustainable and circular carbon economy, but much work in this field has focused on model microorganisms. Here the authors provide their perspective on the potential value of non-model microbes, and how that potential could be realised.

A blueprint for designing the next-generation of #synthetic C1 #microbes @natureportfolio.nature.com / We outline how to engineer non-canonical hosts, apply modeling & C1-inducible promoters & integrate sustainability metrics for carbon-efficient #biomanufacturing
www.nature.com/articles/s41...

6 months ago 6 3 0 0
Post image

The very 1st #Course on #SynBio & #Metabolic #Engineering of #Pseudomonas at Cold Spring Harbor Asia successfully completed in Suzhou, #China! Excellent group of students & lecturers, w/time for culture, food & stand-up paddling alongside the science—thanks to all who participated & stay tuned 4+!

6 months ago 10 2 0 0
Post image

Welcome to the social media account of the International Microbiology Literacy Initiative (IMiLI). Nearly 1,000 researchers freely contribute to the IMiLI project integrating microbiology into education providing downloadable resources for all. Explore at imili.org

6 months ago 13 13 1 4
Preview
Synthetic Horizontal Gene Transfer for Ecosystem Restoration Restoring endangered ecosystems has become a pressing issue as the effects of global warming continue to harm existing communities. Over the last decade, several studies have suggested the use of synt...

Who is afraid of HGT? True, antibiotic resistances disseminate through it. But we can also leverage the same channels for spreading good stuff at a very large scale and fortifying the env microbiome with beneficial activities www.biorxiv.org/content/10.1... by Victor Maull & @ricardsole.bsky.social

6 months ago 9 3 1 0
Preview
Obituary information for Andrew Donald Hanson View Andrew Donald Hanson's obituary, contribute to their memorial, see their funeral service details, and more.

Here is Andrew’s obituary, where you can share a tribute or plant a tree in his memory as a way to honor his life 🕊️
www.forestmeadowsfh.com/obituaries/A...

7 months ago 6 6 0 1

We are deeply saddened by the news that Andrew D. Hanson (@adhansonlab.bsky.social) is no longer with us. He was an exceptional scientist, mentor, and leader in multiple fields. He constantly reminded us that over-promising would backfire. Rest in peace, Andrew.

7 months ago 23 17 3 1

Andrew was a force of nature. He remained active until the very end and wrote a couple of very moving, lucid, and sharp farewell emails that I will always treasure. R.I.P. Andrew 🕊️

7 months ago 5 0 0 0
Advertisement
Post image

Delighted to join #MetabolicEngineering as Associate Editor w/Sang Yup Lee, Jay Keasling, I. Borodina, C. Maranas & C. Wittmann. I'll handle submissions in #SyntheticMetabolism, #Pseudomonas, #SynBio, new-to-nature #bioproduction & #EnvironmentalBiotechnology!

7 months ago 8 0 0 0

Saying goodbye to Elio Schaechter, a titan of the #Microbiology field. Farewell Elio!

8 months ago 4 1 2 0
Preview
Synthetic C1 metabolism in Pseudomonas putida enables strict formatotrophy and methylotrophy via the reductive glycine pathway | mBio Soluble C1 feedstocks, such as formate and methanol, have gained attention as sustainable substrates for biotechnology, with the potential to reduce greenhouse gas emissions and reliance on sugar-based resources. Despite their promise, the metabolic ...

#Synthetic C1 #metabolism in #Pseudomonas putida enables strict formatotrophy and methylotrophy via the reductive glycine pathway—led by J. Turlin, M. G. Alván, @oscarpuiggene.bsky.social w/@stefanodonati.bsky.social & @sebwenk.bsky.social @mbio.bsky.social #SynBio
journals.asm.org/doi/10.1128/...

8 months ago 12 5 0 0

🔍Problems with synthetic C1 metabolism? The @pabnik.bsky.social group identifies seven major barriers limiting its deployment in microorganisms and proposes specific strategies to overcome each of them. Check out their paper 👉https://doi.org/10.1093/femsre/fuaf011

9 months ago 4 3 0 0
Post image

📍 Milan | TODAY!
Join Amedea Perfumo & @pabnik.bsky.social at #FEMS 2025 for a dynamic session🧬 "Something (very) old, something new: Innovative microbial solutions for sustainability challenges
🕦 15 July | 11:30–13:00 | Tower Lounge
🔗 femsmicro.org
▶️ youtu.be/0-bhcMpjJ_c
#TolerateEUProject

9 months ago 4 2 1 0

Looking forward to see old MicroFriends and make some new ones at #FEMS2025!

9 months ago 7 0 0 0

Check out our newest article led by @oscarpuiggene.bsky.social !

9 months ago 5 1 0 1
Advertisement