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Posts by EMBL-EBI Training

A zoom screenshot showing smiling faces looking to screen. The words below them say: Data-driven approaches to understanding dementia. 13 – 17 April 2026. EMBL's European Bioinformatics Institute. UK Dementia Research Institute and EMBL-EBI logos are also in frame.

A zoom screenshot showing smiling faces looking to screen. The words below them say: Data-driven approaches to understanding dementia. 13 – 17 April 2026. EMBL's European Bioinformatics Institute. UK Dementia Research Institute and EMBL-EBI logos are also in frame.

Thank you to everyone who joined the UK Dementia Research Institute and us online this week for our essential training course 'Data-driven approaches to understanding dementia'

We're inspired by you all and cannot wait to see where your research takes you in this vital study.

@ukdri.ac.uk
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2 days ago 1 0 0 0
Graphics image showing webinar at EMBL-EBI about Discover and explore bioimages online: the new BioImage Archive website. The webinar will run on 23 April 2026 at 14:30 UK time. Image credit: Rebecca Nicholl, EMBL-EBI

Graphics image showing webinar at EMBL-EBI about Discover and explore bioimages online: the new BioImage Archive website. The webinar will run on 23 April 2026 at 14:30 UK time. Image credit: Rebecca Nicholl, EMBL-EBI

The image shows the webinar speakers are Teresa Zulueta Coarasa and Matthew Hartley.

The image shows the webinar speakers are Teresa Zulueta Coarasa and Matthew Hartley.

Join our upcoming webinar that introduces the new BioImage Archive (BIA) website – redesigned to make biological imaging data more accessible, discoverable, and reusable than ever before. Registration is free but essential:
www.ebi.ac.uk/training/eve... #Bioimaging #OpenScience #FAIRdata

3 days ago 1 1 0 0
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Welcome to your new on-demand training newsletter from EMBL-EBI Training EMBL-EBI Training on-demand newsletter. News, updates, and features from the on-demand training catalogue at EMBL's European Bioinformatics Insitute.

Interested in our on-demand portfolio? We just published our first LinkedIn newsletter dedicated to all things digital learning.

Check it out for yourself, and discover your next piece of on-demand bioinformatics learning: www.linkedin.com/pulse/welcom...

4 days ago 1 0 0 0
Virtual course at EMBL-EBI. Structural bioinformatics. 19 – 23 October 2026.

Virtual course at EMBL-EBI. Structural bioinformatics. 19 – 23 October 2026.

Structural biology, determining the three-dimensional shapes of biomacromolecules and their complexes, can tell us a lot about how these molecules function and the roles they play within a cell.

Applications are now open until 19 July 2026. Submit yours now: www.ebi.ac.uk/training/eve...

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Decoding spatial transcriptomics through sequences, pixels, and bioinformatics - A step-by-step guide to spatial transcriptomics analysis Decoding spatial transcriptomics through sequences, pixels, and bioinformatics - A step-by-step guide to spatial transcriptomics analysis

A great resource to explore and visualise spatial transcriptomics data!
If you want to learn more about the spatial transcriptomics, view the recordings from our recently concluded webinar series - www.ebi.ac.uk/training/eve...

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How can we see where genes are active in tissues?

The Spatial Transcriptomics Portal combines imaging and molecular data to map gene activity in spatial context.

Explore how cells interact and develop.
www.ebi.ac.uk/about/news/u...
@bioimagearchive.bsky.social @expressionatlas.bsky.social

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Webinar at EMBL EBI: Curating proteins involved in Antimicrobial Resistance (AMR) in UniProt. 16 April 2026, 15:00-16:00 UK Time. Speaker: Paul Denny, EMBL-EBI

Webinar at EMBL EBI: Curating proteins involved in Antimicrobial Resistance (AMR) in UniProt. 16 April 2026, 15:00-16:00 UK Time. Speaker: Paul Denny, EMBL-EBI

Join our upcoming #webinar to explore how AMR-related protein annotation is represented in #UniProt. Through a series of examples, we will discuss various UniProt resources and how to use them in this context.

Registration is free but essential: www.ebi.ac.uk/training/eve...

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1 week ago 3 1 0 0
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This series will guide you through accessing structural data programmatically with the Protein Data Bank in Europe (PDBe). The series also includes a final session on the AlphaFold Database (AFDB).

Webinar series organisers: Ajay Mishra, Dr. Sudakshina Ganguly, and Flaminia Zane at @ebi.embl.org.

2 weeks ago 1 1 0 0
Webinar series at EMBL-EBI. Accessing structural data programmatically with PDBe. 6 May - 17 June 2026.

Webinar series at EMBL-EBI. Accessing structural data programmatically with PDBe. 6 May - 17 June 2026.

Starting on 6 May, our next webinar series will focus on different levels of programmatic access at @pdbeurope.bsky.social and the #AlphaFold DB.

Registration for each webinar is free but essential: www.ebi.ac.uk/training/eve...

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Webinar at EMBL-EBI: "Spatial transcriptomics in action: a case study from human reproductive development". 8 April 2026, 14.30-15.30 BST. Speaker (with headshot): Valentina Lorenzi, Wellcome Sanger Institute"

Webinar at EMBL-EBI: "Spatial transcriptomics in action: a case study from human reproductive development". 8 April 2026, 14.30-15.30 BST. Speaker (with headshot): Valentina Lorenzi, Wellcome Sanger Institute"

Join us next week for the last #webinar in our
#SpatialTranscriptomics series: Valentina Lorenzi will deliver the talk “Spatial transcriptomics in action: a case study from human reproductive development”.

Registration is free but essential: www.ebi.ac.uk/training/eve...

2 weeks ago 2 1 0 0

The training collection is available and shareable under a Creative Commons Attribution 4.0 International license. Please do credit EMBL-EBI Training and the collection's authors when reusing.

Written by: Hendrina Francina Harmse, James McLaughlin, and Helen Parkinson at @ebi.embl.org

3 weeks ago 1 0 0 0

This collection is suitable for data generators, data stewards, data/resource and tools developers interested in creating/maintaining clean and AI ready data in the bioinformatics space. No prior knowledge of the field is required, but a basic knowledge of artificial intelligence would be helpful.

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EMBL-EBI Training. AI readiness for the future of biomedical data. New on-demand training collection created in association with AIBIO UK.

EMBL-EBI Training. AI readiness for the future of biomedical data. New on-demand training collection created in association with AIBIO UK.

In collaboration with @aibio-uk.bsky.social we've created a training collection that features lectures and discussions from AI experts in bioinformatics from academia and industry, focused on shaping future AI readiness within the community.

Discover the free training: www.ebi.ac.uk/training/onl...

3 weeks ago 4 0 1 0

We're incredibly proud of our core facilities knowledge exchange workshop and the global impact it has had.

Read all about Dr Laura Perlaza‑Jiménez's experience last year in the @emblaustralia.org post below.

And view the free course materials for yourself: www.ebi.ac.uk/training/mat...

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Causality in biomedicine: going beyond associations - 2026 Causality in biomedicine: going beyond associations - 2026

Causality in biomedicine: going beyond associations is organised by:
@avakhamseh.bsky.social
@sjoerdvbeentjes.bsky.social
@pablormier.bsky.social

Apply by 21 June: www.ebi.ac.uk/training/eve...

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This new course comes from the work produced by teams at the Broad Institute of MIT and Harvard, EMBL-EBI Training, Harvard T.H. Chan School of Public Health, the Institute of Genetics and Cancer, the School of Informatics, and the School of Mathematics at The University of Edinburgh.

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EMBO Practical Course. Causality in biomedicine: going beyond associations. 4 - 9 October 2026. Hinxton, United Kingdom. EMBO and EMBL-EBI logos. Funded by EMBO for excellence in the life sciences.

EMBO Practical Course. Causality in biomedicine: going beyond associations. 4 - 9 October 2026. Hinxton, United Kingdom. EMBO and EMBL-EBI logos. Funded by EMBO for excellence in the life sciences.

Gain practical experience using widely adopted tools and resources to apply causal techniques in real-world biomedical contexts.

Applications are now open until 21 June. Grants and bursaries are available for this @embo.org Practical Course: www.ebi.ac.uk/training/eve...

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Graphics image about a webinar on managing spatial data, which will run on first April 2026 at 14:30 UK time. Image credit: Karen Arnott, EMBL-EBI

Graphics image about a webinar on managing spatial data, which will run on first April 2026 at 14:30 UK time. Image credit: Karen Arnott, EMBL-EBI

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Join us next week for the sixth #webinar in our
#SpatialTranscriptomics series: Thomas C Smits and Morgan L. Turner will present the talk about managing spatial data.

Registration is free but essential: www.ebi.ac.uk/training/eve...

3 weeks ago 2 1 0 0
EMBL-EBI course. Microscopy data analysis: machine learning and the BioImage Archive. 16 - 20 March 2026. EMBL's European Bioinformatics Institute. Virtual.

A zoom screen shot of smiling people is shown alongside this event name.

EMBL-EBI course. Microscopy data analysis: machine learning and the BioImage Archive. 16 - 20 March 2026. EMBL's European Bioinformatics Institute. Virtual. A zoom screen shot of smiling people is shown alongside this event name.

Thank you to everyone who joined us for this week's virtual bioinformatics training course dedicated to microscopy data analysis and the @bioimagearchive.bsky.social.

Further your own microscopy knowledge with our on-demand training resources dedicated to the subject: www.ebi.ac.uk/training/on-...

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Blog authors: Anica Araneta, University of Cambridge and Brendan Rouse, EMBL Heidelberg.

Contributors: @loiclnlg.bsky.social, University of Cambridge and Flaminia Zane, EMBL’s European Bioinformatics Institute.

@embl.org
@ebi.embl.org

#AcademicSky #GreenSky
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1 month ago 0 0 0 0
It’s time to consider the environmental impact of computing – Course and Conference Office

Since then, we've seen a huge impact in our industry and an outpouring of thanks from you for creating this resource.

We spoke to the partners involved, to understand their drive behind the tutorial and who they hope it will help to create a blog post: www.embl.org/about/info/c...

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1 month ago 0 0 1 0
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EMBL-EBI Training. Sustainable computing 
in science: an introduction to the environmental impacts of computational research. Developed in collaboration with the Cambridge Sustainable Computing Lab 
at the University of Cambridge.

EMBL-EBI Training. Sustainable computing in science: an introduction to the environmental impacts of computational research. Developed in collaboration with the Cambridge Sustainable Computing Lab at the University of Cambridge.

Last month, we released our hugely popular online tutorial dedicated to sustainable computing: www.ebi.ac.uk/training/onl...

Developed in collaboration with the Cambridge Sustainable Computing Lab. It was supported by funding from the Wellcome Trust Foundation and the University of Cambridge.

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Congratulations to all those involved in #AlphaFold on the next step in this partnership.

To learn more about how to use this breakthrough resource, we recommend our free online tutorial 'Navigating the AlphaFold database': www.ebi.ac.uk/training/onl...

Authors: Paulyna Magaña & Ivanna Pidruchna

1 month ago 2 0 0 0

Through a step-by-step Python workflow, you will apply these different EMBL-EBI tools to analyse an example protein, gaining practical experience in automating large-scale protein data analysis.

Course fee: £50.00
Time zone: UK
Register: www.ebi.ac.uk/training/eve...

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1 month ago 2 0 0 0

Our one-day, hands-on virtual workshop will guide you through a structured, programmatic workflow using these EMBL-EBI resources:

- AlphaFold
- @interprodb.bsky.social
- Job Dispatcher
- UniProt
- @pdbeurope.bsky.social

Deadline to register: 8 April 2026, or sooner if all places are taken

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Virtual course

From sequences to structures: protein characterisation using EMBL-EBI APIs
EMBL-EBI resources in practice 

2 June 2026

Virtual course From sequences to structures: protein characterisation using EMBL-EBI APIs EMBL-EBI resources in practice 2 June 2026

Last few places remaining for our virtual workshop dedicated to putting European Bioinformatics Institute | EMBL-EBI resources in practice: www.ebi.ac.uk/training/eve...

#AlphaFold #ProteinBiology #Bioinformatics #Python #Sequencing

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Webinar at EMBL-EBI: Integrating single-cell and spatial transcriptomics to map the rules of neurological conditions. 18 March 2026. 14:30-15:30 GMT. Speaker (with headshot): Koen Rademaker, Wellcome Sanger Institute

Webinar at EMBL-EBI: Integrating single-cell and spatial transcriptomics to map the rules of neurological conditions. 18 March 2026. 14:30-15:30 GMT. Speaker (with headshot): Koen Rademaker, Wellcome Sanger Institute

Join us next week for the fifth #webinar in our
#SpatialTranscriptomics series: Koen Rademaker will present the talk "Integrating single-cell and spatial transcriptomics to map the rules of neurological conditions".

Registration is free but essential: www.ebi.ac.uk/training/eve...

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1 month ago 2 0 0 0
A group of people stand smiling and looking up to camera at EMBL's European Bioinformatics Institute.

Underneath them, it says 'Introduction to multi-omics data integration and visualisation. 2 – 6 March 2026 | EMBL's European Bioinformatics Institute. Hinxton, UK.'

EMBL-EBI logo.

A group of people stand smiling and looking up to camera at EMBL's European Bioinformatics Institute. Underneath them, it says 'Introduction to multi-omics data integration and visualisation. 2 – 6 March 2026 | EMBL's European Bioinformatics Institute. Hinxton, UK.' EMBL-EBI logo.

What a week! We're so grateful to everyone who came together for 'Introduction to multi-omics data integration and visualisation' by EMBL-EBI Training.

Missed out this time? Sign up for updates on the 2027 edition and be among the first to hear as it develops: www.ebi.ac.uk/training/eve...

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1 month ago 3 2 0 0
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Applications close for our popular Proteomics Bioinformatics training course on 15 March.

Only ten days left to submit yours, for a chance to join us and @vibtrainconf.bsky.social this summer: www.ebi.ac.uk/training/eve...

Financial assistance is available.

@ebi.embl.org
@events.embl.org

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1 month ago 5 1 0 0

EMBL-EBI Training has had to cancel 'Bioinformatics for immunologists' at short notice. If you have any queries, please send us an email at courses@ebi.ac.uk.

We apologise for any inconvenience caused, and hope to see you at a future event with EMBL soon.

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