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Posts by Colautti Lab

"Together we must reestablish the idea that older people are advocates and protectors for those beginning their careers. In an era when young people are being treated like meatware in an anonymous employment algorithm, we need to bring them all the wisdom, encouragement and connections we can."

3 days ago 10 1 0 0
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New to bsky, trying to (re)connect with eco-evo folks. I'm an evolutionary ecologist who studies how rapid evolutionary dynamics shape community and ecosystem processes. My work integrates experimental evolution, population genetics, and community ecology, with an emphasis on biological invasions.

4 days ago 14 4 1 0

I knew Canada was angry but didn’t realize it was this bad: “more Canadians flew to overseas destinations than drove to the U.S.”

1 week ago 0 0 0 0
Rapid adaptation and extinction in synchronized outdoor evolution experiments of Arabidopsis Climate change forces species to adapt rapidly to avoid extinction. To directly observe rapid adaptation and extinction, we conducted synchronized evolution experiments with Arabidopsis thaliana in 30...

Our team appeared in The Daily Californian news!

Discussing our experimental evolution in Science Magazine www.science.org/doi/10.1126/... and a recent paper on the threat of genetic diversity loss in PNAS doi.org/10.1073/pnas...

Check it out:

www.dailycal.org/news/campus/...

1 week ago 21 7 1 0
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The System That Decides What Science Gets Published Is Breaking Down The peer review system that validates scientific research is trapped in a self-defeating cycle. A new mathematical model shows why—and what comes next.

@forbes.com picking up the recent work by @carlbergstrom.com & Kevin Gross in @plosbiology.org on the future of peer review.

www.forbes.com/sites/johndr...

3 weeks ago 49 26 2 1

☘️New paper!☘️ Very excited that my 3rd and final data chapter of my PhD with @evoecolab.bsky.social is now published in JEB! We manipulated precipitation and herbivory at field sites in Ontario and Louisiana to test their effects on white clover HCN chemical defense phenotypes

3 weeks ago 16 10 1 0
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Our new experimental evolution study across 30+ locations using the plant Arabidopsis thaliana —— we direct "see" adaptation and extinction to different climates at the genetic as it happens!

Read it in Science
dx.doi.org/10.1126/scie...

@ucberkeleyofficial.bsky.social
@hhmi-science.bsky.social

3 weeks ago 177 104 1 8
Phylogenetic Comparative Methods Phylogenetic Comparative Methods

Hi all. I am very excited that after 6 years I finally got my phylogenetic comparative methods book and online exercises online. Feel free to use and share. The book is here: nhcooper123.github.io/pcm-primer/. Note that it is not finished, we had to abandon it before the sunk costs fallacy broke us

4 weeks ago 286 180 9 3
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#ggtree has a relatively steep learning curve. But after looking at a few Python alternatives eg., toytree, ETE, Bio.Phylo it's hard to match its layout versatility. 21 tree variants with just a few lines of code.
#rstats #phylogenetics #bioinformatics

1 month ago 33 8 3 0

Proud that this work is now published!

We hope it helps orient future #Nanopore long-read sequencing studies hunting for structural variants

Also really happy to share eight new high-coverage (>100x) long-read read pools and assemblies with the #Drosophila community!

doi.org/10.1093/g3jo...

1 month ago 41 21 0 2
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Introgression and parental conflict shape repeated occurrences of postzygotic isolation in Mimulus Postzygotic reproductive isolation is often thought to accumulate as a byproduct of neutral divergence. Yet it frequently evolves rapidly, in line wit…

I am SO THRILLED to share our first fully-lab lab paper!!!!!! Led by @hybridzones.bsky.social & @hagarsoliman.bsky.social, w/ a major assist from @pfschwarz.bsky.social!!!!!!!!!!!!! Read more below, if you're curious (you should be- it's AWESOME!!!!!!!)

link: www.sciencedirect.com/science/arti...

1 month ago 173 67 10 3

This is a nice little essay that scientists-in-training should read. Writing is a process for thinking and developing ideas as much as communicating. Some types of discomfort are productive and should be embraced. Good writing is hard and uncomfortable, and crucial for career progression.

1 month ago 12 6 0 0
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Sleepaway Camp for Scientists - Macleans.ca At the Koffler Scientific Reserve’s new operations centre, researchers can stay where they study

UofT's field station, @ksrjokershill.bsky.social , in the news:

macleans.ca/economy/real...

1 month ago 11 1 0 0

Mostly entering random things into random online forms

1 month ago 1 0 0 0
Wright's generic path diagram showing A as a cause of X, D as a cause of Y and B, C as partial causes of X and Y. (reproduced from Wright, 1920, p. 329)

Wright's generic path diagram showing A as a cause of X, D as a cause of Y and B, C as partial causes of X and Y. (reproduced from Wright, 1920, p. 329)

Photo of Sewall Wright in front of a blackboard with mathematical symbols

Photo of Sewall Wright in front of a blackboard with mathematical symbols

#TodayinHistory #dataviz #Onthisday #OTD 📊
💀Mar 3, 1988 Sewall Wright died in Madison, Wisconsin, USA 🇺🇸
1920: invention of the path diagram to show relations among a network of endogenous and exogenous variables forming a system of structural equations.
Established idea of diagram thinking

1 month ago 16 4 0 0

I’m with you 100% Sandbox learning is efficient but it’s a reason why students have trouble translating their knowledge to the messiness of the real world where there is rarely one single ‘right’ answer

1 month ago 1 0 0 0
The Vatican Museums' Bramante Staircase provides a striking visual metaphor for a vicious feedback cycle in scholarly publishing: rising paper submissions across an expanding landscape of journals strains the limited supply of volunteer peer review labor, which in turn makes editorial decisions less predictable and encourages authors to submit their work more ambitiously, increasing the burden on peer reviewers further still. Image credit: Carl T. Bergstrom

The Vatican Museums' Bramante Staircase provides a striking visual metaphor for a vicious feedback cycle in scholarly publishing: rising paper submissions across an expanding landscape of journals strains the limited supply of volunteer peer review labor, which in turn makes editorial decisions less predictable and encourages authors to submit their work more ambitiously, increasing the burden on peer reviewers further still. Image credit: Carl T. Bergstrom

The process of #PeerReview is vital to contemporary science, but is also under enormous strain. @carlbergstrom.com & Kevin Gross use mathematical models to dissect the threats to the long-term viability of peer review, suggesting ways to stabilize it @plosbiology.org 🧪 plos.io/4kR02bo

1 month ago 24 13 0 2

Great book!

1 month ago 1 0 0 0

Some scientific flaws but mostly it’s ridiculous, over-the-top nonsense that defines good satire

1 month ago 0 0 0 0

… A sports drink company owns the FDA, DHHS, and FCC. They successfully replace water with their Brawndo energy drink to irrigate the world’s crops. This boosts Brawndo’s bottom line, delighting stock owners while dooming the global food supply.

1 month ago 0 0 1 0
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… so maybe the toxic potential of social media tycoons was not yet obvious. Terry Crews as president Dwayne Elizondo Mountain Dew Herbert Camacho is a highlight of the film, and a major plot point involves the selling out of government agencies to corporate interests…

1 month ago 0 0 1 0

The scenario is based on the tired old eugenics trope that conflates financial wealth with Darwinian fitness via some magical thinking about gene function. To be fair, the film was made in 2006, before the trillion-dollar tech companies started to enshitify their own creations.

1 month ago 0 0 1 0

One major flaw in the plot occurs early in the film, when we are told that it took 500 years of inbreeding to create a human population so distracted by mindless entertainment that they fail to elect competent leaders or conduct critical research that could reverse self-annihilating economy

1 month ago 0 0 1 0
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Currently watching: Idiocracy

1 month ago 1 0 0 1
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Screening, sorting, and the feedback cycles that imperil peer review The process of peer review is vital to contemporary science, but is also under enormous strain. This study uses mathematical models to dissect the threats to the long-term viability of peer review, su...

1. Kevin Gross and I have a new paper out today PLOS Biology.

We used economic models based around screening games and the market for unpaid labor to highlight a meltdown cycle threatening peer review.

1 month ago 324 132 8 17

…or the student-to-faculty ratio, which doesn’t always translate to quality mentorship

1 month ago 1 0 0 0

Yeah, I love that term too. I think it is a well-characterized phenomenon, as defined by Cory Doctorow, to such an extent that it shouldn’t even need quotation marks.

1 month ago 1 0 0 0

As an educator, this interference to learning and intellectual development is what concerns me about AI, much more than cheating. Here’s a link to the original white paper:

www.umb.edu/media/umassb...

1 month ago 7 3 1 0
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60 minutes of world-class hockey ending with a few minutes of beer league slop

1 month ago 0 0 0 0
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Come join #LaurierBiology!
We're recruiting 3 tenure-track faculty positions!

Integrative Organismal Zoologist!
careers.wlu.ca/job/Waterloo...

Microbial Systems Biologist!
careers.wlu.ca/job/Waterloo...

Computational Ecology/Modeling Biologist!
careers.wlu.ca/job/Waterloo...

DEADLINE MARCH 22nd!

2 months ago 15 29 2 1