Advertisement Β· 728 Γ— 90

Posts by Noah Houpt

Post image

The Social Lives of Viruses is coming to Vancouver, Canada, from 4th-8th August 2026!

This is a free meeting dedicated to all aspects of virus-virus interactions & evolution.

To apply: socialviruses.zoology.ubc.ca

@sociovirology.bsky.social #socialviruses #evosky #lovevirology #virosky

1 week ago 55 43 0 1

Congrats!! πŸŽ‰πŸŽŠ you’re going to be great there :)

2 months ago 0 0 1 1

Next one in a storm of preprints from our lab's amazing scientists.. Recent-ex-postdoc, #newPI @cathyhernandez.bsky.social studied thermal ecology of marine bacteria isolated near New Haven. Turns out, response of this bacterium to temperatures is shaped by prophages!

#phagesky #microsky

2 months ago 48 16 0 0

Check out the latest from @cathyhernandez.bsky.social, where she shows that prophage activity underlies intraspecific variation in thermal tolerance AND evolutionary rescue in response to extreme temperature challenge.

This is one for prophage peeps and climate change peeps.

2 months ago 8 2 0 0

Excited to share this new Preprint from our lab led by PhD Candidate Carl Stone (defending Tuesday).

Here we present a framework for longitudinal rbTn-Seq and apply it to the Microbial extended growth curve to resolve the fitness seascape through growth, death, and long-term stationary phase!

2 months ago 15 7 0 0

Wow, welcome! Hope you can visit us at the Turner Lab! And hope it’s healing for you to spend some time here.

2 months ago 1 0 0 0

Mutations in filamentous bacteriophages spark eco-evolutionary feedbacks in Pseudomonas aeruginosa www.biorxiv.org/content/10.64898/2026.01...

2 months ago 7 4 0 0

Mutations in filamentous bacteriophages spark eco-evolutionary feedbacks in Pseudomonas aeruginosa www.biorxiv.org/content/10.64898/2026.01...

2 months ago 2 2 0 0
Advertisement

Thanks for reading and feel free to send me any questions you may have about the work! (10/10)

2 months ago 1 0 0 0

We feel our work is just the tip of the iceberg.

Filamentous phages are common, particularly in P. aeruginosa, and are able to drive ecologically and clinically important selection in bacterial populations! (9/10)

2 months ago 2 1 1 0

Overall, our work shows that prophage evolution can drive eco-evolutionary feedbacks across a wide range of population densities.

Further, the pleiotropic consequence of these feedbacks (twitching loss, resistance to lytic phages) are important for bacterial infections. (8/10)

2 months ago 1 0 1 0
Figure demonstrating that bacterial isolates from populations where hyperactive phages emerged had reduced twitch motility and reduced susceptibility to a type-IV-pilus-targeting lytic phage.

Figure demonstrating that bacterial isolates from populations where hyperactive phages emerged had reduced twitch motility and reduced susceptibility to a type-IV-pilus-targeting lytic phage.

On the bacterial side, every population where hyperactive phage emerged ended up with mutations in type-IV-pilus genes (the phage's cell receptor), reduced twitch motility, and resistance to an obligately lytic phage with potential for use in phage therapy. (7/10)

2 months ago 1 0 1 0
Figure summarizing the results of sequencing hyperactive filamentous phage isolates derived from either Pf4 or Pf6.

Figure summarizing the results of sequencing hyperactive filamentous phage isolates derived from either Pf4 or Pf6.

We sequenced 27 hyperactive phage isolates and found that they derived from one of two filamentous prophages present in the ancestral strain's genome (Pf4 and Pf6). Most of our phage isolates had large genomic deletions and many shared identical SNPs across populations. (6/10)

2 months ago 2 0 1 0
Multi-paneled plot providing evidence that hyperactive bacteriophages drove inhibitory filtrate detected in earlier figure.

Multi-paneled plot providing evidence that hyperactive bacteriophages drove inhibitory filtrate detected in earlier figure.

Follow-up experiments revealed that the cause of inhibitory filtrate was the presence of hyperactive filamentous phage mutants! (5/10)

2 months ago 1 0 1 0
Multi-paneled plot describing microbial evolution experiment and observations related to the performance of evolved populations in filtrate.

Multi-paneled plot describing microbial evolution experiment and observations related to the performance of evolved populations in filtrate.

To our surprise, endpoint populations from both density treatments performed much better than the ancestral strain in filtrates. Rather than benefitting evolved populations, filtrate strongly inhibited the ancestral strain, suggesting that an inhibitory factor was at play. (4/10)

2 months ago 1 0 1 0

We tested this idea using a 1,000-generation evolution experiment where we passaged P. aeruginosa at either high or low population density and then used microplate growth curves to measure the performance of endpoint populations in the filtrate of their ancestors. (3/10)

2 months ago 2 0 1 0

We set out to test a long standing hypothesis of eco-evolutionary theory: that high population density, by magnifying the impact of organisms of their environment, should strengthen eco-evolutionary feedbacks. (2/10)

2 months ago 1 0 1 0
Advertisement

Interested in eco-evolutionary feedbacks? Microbial experimental evolution? Pleiotropy? Filamentous phages??

Check out our latest preprint, now up on BioRxiv!

biorxiv.org/content/10.6...

For a quick summary, peep the thread below...🧡 (1/10)

2 months ago 44 16 1 2

Cathy is one of the most brilliant, supportive, and thoughtful scientists and mentors I’ve had the privilege of working with.

I would recommend working with Cathy to any student interested in bacteria-phage interactions.

Congrats, Cathy!! We will miss you dearly.

6 months ago 7 0 1 1
The social lives of viruses | Asher Leeks | TEDxNewEngland
The social lives of viruses | Asher Leeks | TEDxNewEngland YouTube video by TEDx Talks

I gave a talk last year at TEDxNewEngland aimed at introducing the idea of viral sociality to a general audience, including implications for evolution & virology. Video now available online below.

#socialviruses #evosky #virosky πŸ§ͺ

6 months ago 43 17 0 1
HFSP project β€” dal bello lab

πŸ“’ We're seeking a postdoc to work on a project funded by HFSP @hfspo.bsky.social at the intersection of bacterial physiology, ecology and evolution. You can find more details about the project, the position, and how to apply here www.dalbellolab.com/hfsp-project! #bacteria #ecosky #MevoSky #microSky

8 months ago 41 45 1 1
Preview
Functional regimes define soil microbiome response to environmental change - Nature Experimental perturbation of soil pH leads to a generalizable model of the soil microcosm comprising three functional regimes with distinct mechanisms linking environmental change to metabolite dynami...

Published in Nature today! Here, we sought to systematically ask how natural community's metabolism changes with the environment. A simple consumer-resource model can predict N-cycle metabolism (nitrate use) and, more importantly, the mechanism behind its change.
www.nature.com/articles/s41...

9 months ago 67 30 2 4

You got this!! Good luck!

9 months ago 1 0 0 0

Thank you for the encouragement!!

9 months ago 1 0 0 0
Advertisement

Excited to get to work!

9 months ago 3 0 0 0

Excited to get to work on GRS 2027 with @duhitasant.bsky.social!!

Hit me up here or via email if you have any feedback or ideas for the next Micro Pop Biol GRS!

9 months ago 17 4 0 1

Thanks especially to fearless leaders @reeskassen.bsky.social and Christina Burch, and to @drhhnz.bsky.social and @wcratcliff.bsky.social. It was a great to see the process that led up to an amazing 40th anniversary conference πŸŽ‰πŸ°

9 months ago 7 1 0 0

Super stoked and honored to be elected as co-chair along with @ksbakes.bsky.social for the Microbial Population Biology 2029 GRC!

And looking forward to a great 2027 meeting in Andover chaired by @drhhnz.bsky.social and @wcratcliff.bsky.social !

9 months ago 108 11 12 1
Post image

#ASMicrobe day 3 vibes

9 months ago 3 0 0 0

For #ASMicrobe folks - looking forward to a busy phage day on Sunday!

10 months ago 14 7 1 0