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Posts by Sophie Abby

We stumbled upon an unusual gene called 'rqua' in the genome of some freshwater sponges. In microbes, this gene confers the ability to make a ubiquinone analog - rhodoquinone - which can help the respiratory chain run without oxygen.

1 week ago 26 10 1 0
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🧐 Baisse du nombre d'offres d'emploi (post-doctorants, ingénieurs, permanents ou temporaires) en 2025.

🫵 Besoin de vous pour comprendre les raisons de cette diminution via ce sondage : grist.numerique.gouv.fr/o/docs/forms...

📎 Bilan plus détaillé : www.sfbi.fr/blog/article...

3 weeks ago 5 9 0 1

I'm excited to announce that the @sortee.bsky.social Guidelines for Data and Code Quality Control in Ecology and Evolutionary Biology are now published in Peer Community Journal peercommunityjournal.org/articles/10....

1 month ago 30 21 1 0
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Aux origines de la vie : des « membranes » minérales capables de convertir l’énergie Comment des processus géologiques pourraient-ils avoir favorisé l’apparition de la vie sur Terre ?

#ResultatScientifique🔎| Comment des processus géologiques pourraient-ils avoir favorisé l’apparition de la vie sur Terre ?

✍️ Simon Duval
👋 @cnrs-dr12.bsky.social @univ-amu.fr
📕 @natcomms.nature.com
▶️ buff.ly/BIh13pB

1 month ago 1 2 1 0
From Trading Genes to Crafting New Tricks: How Horizontal Gene Transfer Potentiates the Emergence of Novel Functions

Horizontal gene transfer is often depicted as a process distributing pre-existing functions to novel genetic backgrounds. Yet HGT can also increase the rate of functional innovation after transfer. Here's a brief review on the topic: ecoevorxiv.org/repository/v... #evosky #microsky

1 month ago 88 42 2 0

Are you investigating the biology of prokaryotic or eukaryotic cells? Are you looking for an excellent scientific environment to establish and lead your own research team? The I2BC is your place and a new call for team leaders is now open.
More info👇Deadline 22nd April
@i2bcparissaclay.bsky.social

1 month ago 11 17 0 0
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La Biodiversite en Infographies sort ce jeudi 12 mars! Pour comprendre l'effondrement du vivant, pourquoi c'est un grave problème et ce qu'on peut faire de vraiment efficace, avec des données scientifiques représentées clairement..aux editions Tana

1 month ago 100 47 2 2
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Prediction of eukaryotic cellular complexity in Asgard archaea using structural modelling - Nature Microbiology A structural catalogue of the Asgard archaeal pangenome reveals hundreds of eukaryotic-like proteins that suggest a higher degree of cellular complexity in the archaeal ancestor of eukaryotes.

🧵 1/10 New paper out in @natmicrobiol.nature.com from my postdoc at @mib-wur.bsky.social! 🎉

How eukaryote-like was the archaeal ancestor of eukaryotes? Sequence searches alone can't tell us — so we used protein structure prediction to look deeper. 🧬
www.nature.com/articles/s41...

1 month ago 66 36 3 3
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Fantastic collaboration w/ @dbikard.bsky.social @audeber.bsky.social @rayanchikhi.bsky.social labs led by @jmouradesousa.bsky.social : We assessed the rates of variation of anti-phage systems in P4-like satellites and P2 helper phages. Quick conclusion: Huge variation! We focus on 4 key questions/5

1 month ago 48 22 1 1

The best stories are the personal ones. So before we get to the new preprint, stay awhile and listen

#MobileLabs #TREC

1 month ago 27 10 1 2

Giant multicellular magnetotactic prokaryotes in marine sediments academic.oup.com/ismej/advanc... #jcampubs

2 months ago 40 11 7 2

Check out our latest pre-print of our favourite pets - the breviates. This work was led by Zhezhen Yi in collaboration with @andrewjroger.bsky.social and many others! By studying diverse breviates we were able to see how different metabolic pathways can evolved in response to low-oxygen.

2 months ago 23 14 0 0
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Archaea produce peptidoglycan hydrolases that kill bacteria Archaea regularly interact with bacteria but reports of archaea killing bacteria are very rare. This study shows that many archaea encode peptidoglycan hydrolases, which specifically target bacterial ...

Archaea are often surrounded by bacteria. But is there ever active conflict between the two? Can archaea kill bacteria? If so, how do they do it?

Work by @romainstrock.bsky.social shows that some archaea can kill bacteria by secreting peptidoglycan hydrolases. journals.plos.org/plosbiology/...

8 months ago 150 65 5 5
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Evolution and diversity of oxidoreductases involved in redox balance and energy conservation - Nature Ecology & Evolution HORBEC are protein complexes involved in the regulation of redox balance and energy conservation. The authors develop a bioinformatic tool for HORBEC annotation in bacterial and archaeal genomes and r...

Passioned by #bioenergetics? Do not miss our new article on the evolutionary history of oxidoreductases with G. Borrel and @sgribaldo.bsky.social @archaeal.bsky.social @valdeanda.bsky.social @pasteur.fr @cnrs.fr @cnrsbiologie.bsky.social @natecoevo.nature.com (www.nature.com/articles/s41...).

2 months ago 55 33 2 3
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Comparative Genomics of Unicellular Eukaryotes (San Feliu, Spain):
Abstract submission is open, with a short deadline! comparativegenomics2026.com

Join us as we explore the most diverse, surprising, and still largely uncharted branches of the eukaryotic tree.

2 months ago 20 12 0 1
Molecular Biology of Archaea: Life Through the Prism of Archaea In 1977, Woese and colleagues revealed Archaea as a distinct domain of life. Building on this insight, the discovery of Asgard archaea has strengthened the view that many hallmarks of eukaryotic cell…

A reminder to sign up for the 2026 EMBO archaeal meeting im Cambridge: meetings.embo.org/event/26-arc.... Registration is open. We are looking forward to hosting you!

2 months ago 40 35 0 1
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My team at @cbitoulouse.bsky.social is recruiting a postdoc #bioinformatics with solid experience in metagenomic analyses.
Interest in evolution, ecology & MGEs is important.
The offer stands until the perfect candidate is found, and it could be you 🫵

🔁 🙏

#microSky #phagesky #UTIsky
@cnrs.fr

3 months ago 27 55 1 0
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🚨 Postdoctoral Opportunity for Female Scientists🚨

The University of Vienna is awarding at least 20 fully funded 4 year postdoctoral positions to outstanding female scientists

Interested? Get in touch via direct message
careers.univie.ac.at/en/postdoc/e...

#MicroSky 🧪

#PostDoc @univie.ac.at

4 months ago 98 117 0 3
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legend 2025 will be next Tuesday/Wednesday/Thursday.

The detailed program is on legend2025.sciencesconf.org?lang=en

If you are not attending the conference you can still follow the presentations online (Zoom links are on the website).

4 months ago 2 3 0 0
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Dynamic protrusions mediate unique crawling motility in Asgard Archaea (Promethearchaeota) Crawling motility is a hallmark of eukaryotic cells and requires a dynamic actin cytoskeleton, regulated adhesion, and spatially organized signalling pathways1–3. Asgard archaea (phylum Promethearchae...

Asgard on the move ! Watch our videos!
Biorxiv.org/content/10.1101/2025.11.30.690169v1

4 months ago 27 12 0 0

Oxygen production as an electron overflow pathway in ammonia-oxidizing archaea www.biorxiv.org/content/10.6... #jcampubs

4 months ago 10 8 0 0
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The CNRS is breaking free from the Web of Science From January 1st 2026, the CNRS will cut access to one of the largest commercial bibliometric databases, Clarivate Analytics'

From January 1st 2026, the CNRS will cut access to one of the largest commercial bibliometric databases, Clarivate Analytics' Web of Science, along with the Core Collection and Journal Citation Reports.

4 months ago 85 64 0 25
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Exploring the human small intestinal luminal microbiome via a newly developed ingestible sampling device Abstract. Because accessing the small intestine is technically challenging, studies of the small intestinal microbiome are predominantly conducted in patie

Exploring the human small intestinal luminal microbiome via a newly developed ingestible sampling device url: academic.oup.com/ismecommun/a....
I am proud to have contributed to this work with Alexandre Tronel, Thomas Soranzo (Pelican Health), @alegouellec.bsky.social + all other co-authors.

4 months ago 5 1 0 0
Une scientifique dit: "Attendez une minute... Les gens sur le spectre autistique sont sur-représentés dans la recherche scientifique. Mais... Mais ça veut dire que..."
Un autre réalise soudain, et murmure: "Mon Dieu..."

La légende dit: "L'autisme cause les vaccins."

Une scientifique dit: "Attendez une minute... Les gens sur le spectre autistique sont sur-représentés dans la recherche scientifique. Mais... Mais ça veut dire que..." Un autre réalise soudain, et murmure: "Mon Dieu..." La légende dit: "L'autisme cause les vaccins."

Vaccines and Autism, par @zachweinersmith.bsky.social

5 months ago 565 75 2 3
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🔥 At conferences, who asks the questions shapes who gets seen. Across 24 ID&CM meetings, women were 55% of delegates but asked 36% of questions.
💬 When women moderate or speak first, others follow.
Let’s change the pattern

bit.ly/47VL0eH
🙏 @maudsalmona.bsky.social & MicroID EmpowHERment consortium

5 months ago 16 12 0 1

So Nature-Springer, which absorbs several billion dollars in research funding each year, provides us with an API that attributes all citations to the first article in the volume.

Well done Springer Nature, at least I know where not to submit my next paper.

5 months ago 3 4 0 0
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This paper has been a must! Great collaboration with @mkrupovic.bsky.social and @yifanzhou.bsky.social, a N&V by a legend of halophilic archaea tinyurl.com/yc3dcv72, and one picture of one of our expeditions to Dallol making the cover of the November issue of @natmicrobiol.nature.com

rdcu.be/eLtCH

5 months ago 78 32 1 2
Portail Emploi CNRS - Offre d'emploi - Postdoctoral researcher Microbiology (M/F)

JOB OFFER #PhageSky

We have a postdoc position opening in my group to investigate phage-MGE interactions !

We're based in the very nice city of Lyon, France @mmsb-lyon.bsky.social

Contact me for more info !

>> Apply on the CNRS webpage emploi.cnrs.fr/Offres/CDD/U...

5 months ago 29 42 0 0
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The team at our research site in the alps

The team at our research site in the alps

📣 New PhD student position opening in my lab!
Soils are full of microbes, but how many are active?
Surprisingly, we still lack reliable methods to answer this.
If you are interested in microbial dormancy and are fascinated by the Alps and glacier forefields, contact me.
🏔️ 🦠 💤 🧬 🎓

6 months ago 47 45 2 3
Portail Emploi CNRS - Offre d'emploi - Thèse en Microbiologie-Biochimie (H/F)

Open position to work on Type IX secretion (#T9SS) in our lab, in collaboration withe the group of Eric Reynolds at the Dental School of the University of Melbourne. Please spread the word, and forward to anyone potentially interested ! Apply here:
emploi.cnrs.fr/Offres/Docto...

6 months ago 25 35 0 2