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Posts by Ayari Fuentes-Hernandez

Reminder! Abstract submission is April 19.

5 days ago 0 0 0 0
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REMINDER - Abstract submission deadline for MEEHubs2026 is April 19! Get you abstract in and present at one of the hubs August 3-5, 2026✨You'll be in great company! We have a fantastic lineup of speakers‼️

Links and more info here: meehubs.org

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Please register and submit an abstract to MEEHubs2026!

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Registration is open for MEEHubs 2026!

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Excited to share our latest work! 📝

We measured the fitness effect of 136 AMR genes and found that many are neutral or even beneficial without selection. 🤯🧬

Oxygen availability can flip their fitness and our stochastic model indicates that oxygen fluctuations help maintain them.

Learn more 👇🏼

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This is a very beautiful paper from the dissertation of @daniireyes.bsky.social in @ayari.bsky.social lab on how species interactions matter for antibiotic resistance.

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New preprint from the lab!

Stress-Induced Cooperation Promotes Tolerance in Resource-Limited Auxotrophic Microbial Consortia.

Great and long journey with great collaborators.

3 months ago 13 6 0 0

We’re very happy to share the results from the last chapter of my PhD, now out as a preprint on bioRxiv
www.biorxiv.org/content/bior...

3 months ago 17 8 1 1
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Research Associate / Postdoctoral Fellow - Honeybee Bacteriophages and Advanced Biotechnology - University of Canterbury | Te Whare Wānanga o Waitaha

We’re looking for a postdoc to join the Hendrickson lab!
The project will involve dissecting the molecular mechanisms of a fascinating mobile element in our honeybee biocontrol phages. Sound like something you would be interested in? Get in touch! Details:
jobs.canterbury.ac.nz/jobdetails/a...

3 months ago 19 40 0 2
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I am very excited to announce that a fully funded PhD position is available in my group.

Topic: Synergistic coevolution in mono-specific and multi-species microbial consortia

Please RT or forward this information to interested candidates.

Deadline: 11.01.26

More info:

shorturl.at/f1TuF

4 months ago 52 67 0 2
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I am recruiting graduate students for Fall 2026! The Microbial Ecosystems Lab @hot-mes-asu.bsky.social at ASU studies microbial interactions, spatial ecology, and imaging-driven microbiome science. If you love microbes, microfluidics, or single-cell analysis, let’s talk! www.microbialeco.systems

4 months ago 23 30 0 0
Diagram illustrating "feed the enemy's enemy": ampicillin inhibits Pseudomonas aeruginosa. Citrobacter freundii acidifies the environment, further inhibiting P. aeruginosa.

Diagram illustrating "feed the enemy's enemy": ampicillin inhibits Pseudomonas aeruginosa. Citrobacter freundii acidifies the environment, further inhibiting P. aeruginosa.

New preprint from our lab www.biorxiv.org/content/10.1...! Andrea Dos Santos and Clément Vulin combine experiments and models showing how adding glucose can strengthen negative interactions between microbial species. This can be used in tandem with antibiotic treatment to inhibit pathogens!

4 months ago 62 33 3 0
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Applications for the MEME programme (www.evobio.eu
) are now open! MEME is a research- and mobility-oriented master’s in evolutionary biology (& I’m a proud alumna!), jointly run by the Unis of Groningen, Uppsala, Montpellier, and LMU Munich, with Harvard and Lausanne as partners. Spread the word!

5 months ago 38 39 2 1
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We’re back! ✨ The next #MeeHubs26 is coming with 7 hubs across the globe and incredible lineups at each. Can’t wait to share more soon! meehubs.org

6 months ago 22 12 0 4
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Assistant or Associate Professor in Microbiology The Department of Biology in the College of Arts and Sciences at the University of Kentucky in Lexington, KY seeks to fill a tenure-eligible faculty position at the Assistant or Associate Professor le...

The Department of Biology at the University of Kentucky is hiring a Microbiologist (broadly defined). Microbial eco-evo folks, this is your sign to come work with us. Not in the search committee, but happy to answer questions.
ukjobs.uky.edu/postings/600...
#microbiology #ecology

6 months ago 29 49 0 1
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While you wait for the next MEEhubs conference: We've written up the participants' impressions, the organisers' thoughts, reflections on the expectations we scientists have on conferences, and much more in @femsjournals.bsky.social, led by Ariane Wenger. Check out doi.org/10.1093/fems....

7 months ago 7 4 0 0
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Convocatoria Plazas IE Sé parte de una comunidad académica y científica de ecología, sostenibilidad e impacto.

✳️ En el Instituto de Ecología de la UNAM: 🧵3/3

📢🧪 Técnico/a en comunicación de la ciencia

🤝 Técnico/a en gestión de proyectos transdisciplinarios

www.ecologia.unam.mx/convocatoria...

7 months ago 1 1 0 0

✳️ En el Instituto de Ecología de la UNAM: 🧵2/3

🌱 Investigador(a) en síntesis ecológica
🦠 Investigador(a) en ecología de enfermedades 🦠
🏬 Investigador(a) en ecología urbana 🏬

7 months ago 1 1 1 0
CONVOCATORIA PUESTO INVESTIGADOR EN: BIOLOGÍA, ECOLOGÍA, COMPORTAMIENTO Y CONSERVACIÓN DE ARTRÓPODOS EN ECOSISTEMAS TERRESTRES CONVOCATORIA PARA OCUPAR PUESTO DE INVESTIGADOR (TITULAR A)

📢📢 Varias plazas disponibles para investigador@s y técnic@s académic@s en México 🧵

✳️En el INECOL: investigador(a) en biología, ecología, conservación y comportamiento de insectos 🐝🐞🪲🦗🐜

7 months ago 1 1 1 0
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Plasmids promote antimicrobial resistance through Insertion Sequence-mediated gene inactivation Antimicrobial Resistance (AMR) is a major threat to public health. Plasmids are mobile genetic elements that can rapidly spread across bacterial populations, promoting the dissemination of AMR genes i...

New paper out! 🔈🔈📣📣

Plasmids promote antimicrobial resistance through Insertion Sequence-mediated gene inactivation.

Combining experimental and computational approaches, we unveil how two of the most prevalent bacterial MGE accelerate the evolution of AMR. 🧵👇🏻

www.biorxiv.org/content/10.1...

8 months ago 51 29 2 5
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Group Leader – Molecular Systems Biology Unit Are you ready to lead groundbreaking research in Molecular Systems Biology? Join us at EMBL! We are seeking a motivated scientist to lead an independent research group, addressing original biological ...

Ready to lead pioneering research that bridges systems-level investigations of biological systems to molecular mechanism? The EMBL Molecular Systems Biology Unit in Heidelberg is hiring a Group Leader!

8 months ago 72 78 1 1
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A two year post-doctoral position at the BacterialGenome Plasticity Unit starting October 1st - Research

Postdoc position to work at the Institut Pasteur with Alex Kaminski and Didier Mazel on Z-DNA phages ! research.pasteur.fr/en/job/a-two...

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A 2 yr postdoc position at the Bacterial
Genome Plasticity Unit of the Institut Pasteur (Paris) led by @amazeld.bsky.social in collaboration with Pierre-Alexandre Kaminski, funded by the French National Research Agency 👇

8 months ago 11 16 1 0

We are on the lookout for postdocs for two different projects at the intersection of ecology, evolution, and the human microbiome.

See thread for more information and reach out!

9 months ago 104 114 2 1

Do plasmids evolve faster 🐇, slower 🐢, or just like chromosomes 🧬?

In our new paper, we tackled this question using theory, simulations, bioinformatics, and experiments!

👇 Check out all the details in Paula’s thread!

Hint: 🐇 (most of the time)

9 months ago 71 39 2 2
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Universal rules govern plasmid copy number - Nature Communications Plasmids exhibit a broad range of sizes and copies per cell, and these two parameters appear to be negatively correlated. Here, Ramiro-Martínez et al. analyse the copy number of thousands of diverse b...

🚨🚨New paper out in @natcomms.nature.com!!

Come for the first large-scale analysis of plasmid copy number across species,
stay for one of the most intriguing results of my lab: universal scaling laws in plasmid biology! 📈🧬

👉 www.nature.com/articles/s41...

9 months ago 185 85 4 4
A blue poster describing opportunities to join the Bernhardt Lab -- for more information please see https://www.bernhardtlab.org/join-us

A blue poster describing opportunities to join the Bernhardt Lab -- for more information please see https://www.bernhardtlab.org/join-us

✨ The Bernhardt Lab at the University of Guelph is recruiting graduate students for 2026! Join us! We have several fully funded grad positions available ✨

Please spread the word!

www.bernhardtlab.org/join-us

#CSEE2025

9 months ago 106 101 1 2

We are recruiting a tenure-track assistant professor in molecular microbiology in our department in Lausanne! Do consider appyling!!

10 months ago 37 60 0 0
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UZH: Postdoctoral researcher in microbiology The Department of Quantitative Biomedicine is an interdisciplinary biomedical research unit that combines basic science with biotechnological and medical research, using both experimental and computat...

We are looking for a highly motivated postdoc to work on pathogen interactions. Please send in your application via

jobs.uzh.ch/job-vacancie...

10 months ago 25 34 0 5
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New preprint led by @brunoluviano.bsky.social & Fernando Santos.

We show that filamentation enhances bacterial survival under toxic stress — not as collateral damage, but as a regulated morphological response.

TL;DR: Filamentation isn’t a symptom, it’s a strategy!
www.biorxiv.org/content/10.1...

11 months ago 44 15 0 2