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Posts by Matthieu Leray, PhD

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8/8 Work led by #YanZhang @UZH @eawag.bsky.social , with many co-authors and data contributors across 40+ institutions. @mattleray.bsky.social @merinrejichacko.bsky.social @leeselab.bsky.social @wslresearch.bsky.social @loicpellissier.bsky.social & many more 🇨🇭 🇩🇪 🇫🇷 🇨🇳 🇧🇷 🇺🇲 🇬🇧 🇦🇺 🇹🇭 🇪🇸 🇯🇵 🇳🇴 🇦🇹

2 days ago 3 1 0 0
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If you are a female early career scientist in STEM fields and want to find community and mentorship, these two conferences at UCLA (4/17-18) are for you!! there are slots and travel grants still available, I will be talking at both and look forward to meeting you! 🧪🌎🧬🌊🦠🌿

3 weeks ago 27 22 1 0
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Knock knock, no one’s there. Study finds scientists’ jokes mostly fall flat Survey examines how often academics attempt jokes during conference talks — and how these attempts at comedy land.

Yep: A survey of 500 talks at biology meetings indicates that "Two-thirds of the attempts at humour during these talks fell flat, drawing either polite chuckles or no laughter at all"

www.nature.com/articles/d41...

#academia

1 month ago 5 2 1 1

there's so much bad in the world but there's also people who lift up and carry an elderly bat around every day so he can pretend he's flying again, and that's the part of the world I think is worth fighting for

1 month ago 22628 6904 88 165
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Society publishers are learned societies publishing research for their scholarly communities. At the NSO, publishing is mission-driven: we reinvest in our members, support their research through our journals and uphold research integrity. 🌿🔬 #SocietyPublishing #OpenScience

1 month ago 14 6 0 0
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Snails have this really cool structure called a radula that they used to scrape hard surfaces for food. It's quite entertaining to watch 😅

1 month ago 113 18 5 4
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🤔Looking to make your #code more #reproducible? Check out our new and improved guide to Reproducible Code! 🧪🌍️

Find it here👇️
buff.ly/10TeNok

@nhcooper123.bsky.social
@britishecologicalsociety.org

2 months ago 64 43 0 1
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Time to publish responsibly: DAFNEE, a database of academia-friendly journals in ecology and evolutionary biology Abstract. The current economics of scientific publishing reveal a profound imbalance: academia pays prices far exceeding the actual costs of publication. R

Responsible publication of your research!

To help you do this @nicolasgaltier.bsky.social and coauthors have put together a handy database of academia-friendly journals, DAFNEE. You can read about it in their article recently published in @jevbio.bsky.social:

doi.org/10.1093/jeb/...

2 months ago 40 29 0 2
A schematic image showing Recent changes in reef zonation of western Atlantic coral reefs, brought about by lack of recruitment of elkhorn, staghorn, and massive boulder corals. Without these key reef builders, the reefs have already measurably eroded. Image credit: Rashpal Dhilon. Adapted from ref. 6, which is licensed under CC BY 4.0.  The panel on the left labeled Late Pleistocene to ~1978 shows a vibrant ecosystem, the middle panel (the 1980s) is depleted but still many corals remain (though some key species are lost).  The panel on the right (2020s) is like a moonscape with a few hardy species left.

A schematic image showing Recent changes in reef zonation of western Atlantic coral reefs, brought about by lack of recruitment of elkhorn, staghorn, and massive boulder corals. Without these key reef builders, the reefs have already measurably eroded. Image credit: Rashpal Dhilon. Adapted from ref. 6, which is licensed under CC BY 4.0. The panel on the left labeled Late Pleistocene to ~1978 shows a vibrant ecosystem, the middle panel (the 1980s) is depleted but still many corals remain (though some key species are lost). The panel on the right (2020s) is like a moonscape with a few hardy species left.

Very effective illustration of what has happened to Florida's coral reefs in response to anthropogenic climate and environment change. The loss of this important ecosystem is all but complete - attempts to rescue it discussed here: www.pnas.org/doi/10.1073/... 🪸🧪🌊

2 months ago 97 37 1 4
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A hex sticker with a text that reads Hello Data Science with green, yellow and pink scatterplot points in the background. There is a web address www.hellodata.science

A hex sticker with a text that reads Hello Data Science with green, yellow and pink scatterplot points in the background. There is a web address www.hellodata.science

📖 Big news! We just released the first five chapters of our new book, Hello Data Science. It is a fully open-access resource written for beginners. Please help us spread the word! A few points about the book are below 👇

🔗 www.hellodata.science

#rstats #datascience #tidyverse

3 months ago 199 82 4 2
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Ecological insights from three decades of forest biodiversity experiments - Nature Reviews Biodiversity Experiments manipulating tree species diversity and measuring effects on ecosystem function have been important tools for assessing how biodiverse forests can accumulate biomass, store carbon and help...

🧪

3 months ago 7 2 0 1

Now that shutdown is over, I'm looking forward to #SICB2026 in Portland, Oregon in January! Please check out Session 18: A Stinging Sense of Self: Cnidarian Cell Type Evolution on Sunday Jan. 4 at 10:00am! Also please reach out if you're interested in making lunch/dinner plans during the conference!

5 months ago 18 5 1 0
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My first hairy #shrimp!!! Suuuuuper stoked to see this rare holy grail species!
The #hairyshrimp (Phycocaris simulans) aka the #AlgaeShrimp, is a nearly impossible to see tiny tiny tiny little varmint.

#phycocarissimulans #🦐 #calimari #muckdiving #tulamben #tulambenbali #bali

3 months ago 49 12 1 1
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🚨 Research Highlight | New tools—Surprising findings: A new study shows human impacts cause relatively little changes in energy flow on coral reefs

📖 Read the research highlight ➡️ buff.ly/J52H2WN

📖 Read the full paper ➡️ buff.ly/W98t51d

3 months ago 3 6 0 0
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Release Next time I'll try to be FASTA · tseemann/any2fasta New features Option -k is keep processing even when some inputs fail option -g to include GBK version suffix option s to strip desc from>id desc in ID lines Support for PDB protein structure forma...

💾 any2fasta 0.8.1 is released!

The FASTA format is now 40 years old (Pearson & Lipman) and any2fasta makes it easy for your scripts and pipelines that accept FASTA to also accept other formats, even if compressed! eg. .gbk.gz

#bioinformatiocs #microbiology #genomcs
github.com/tseemann/any...

3 months ago 45 15 1 0
Adult male (small) and female (large) of Armillifer sp. Looks like a big and small crinkle cut french fry, also with paired hooks at the front. 

Both photos from this paper:
https://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0000320

Adult male (small) and female (large) of Armillifer sp. Looks like a big and small crinkle cut french fry, also with paired hooks at the front. Both photos from this paper: https://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0000320

Adult female Linguatula serrata. Looks like a wrinkly tube, a bit wider at the front and tapering to a tail. There are some hooklike bits at the front.

Adult female Linguatula serrata. Looks like a wrinkly tube, a bit wider at the front and tapering to a tail. There are some hooklike bits at the front.

🚨 Don't eat uncooked snake! Your eyes & lungs can be parasitized by pentastomids, which are a CRUSTACEAN. Adults lack so many features that they weren't believed to be arthropods at all until their DNA was sequenced (and sperm morphology, but that was not widely accepted). Yet, they are!
#Crustmas 🧪

2 years ago 359 82 37 36

Thanks @cfrederica.bsky.social for your hard work on that one! Also thanks to the reviewers and editor at @animalecology.bsky.social for the feedback that helped improve the paper. Will submit there again for sure.

4 months ago 2 0 0 0
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So nice to see this one out! Congrats @cfrederica.bsky.social

4 months ago 3 0 0 0
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Colombia bans all new oil and mining projects in its Amazon Colombia will no longer approve new oil or large-scale mining projects in its Amazon biome, which covers 42% of the nation’s territory, according to a Nov. 13 statement by its environment ministry. Ac...

Very proud to be Colombian right now! 🇨🇴 I hope all neighboring countries follow suit soon! news.mongabay.com/short-articl...

4 months ago 170 38 1 3
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Coral Bleaching: The Equatorial‐Refugia Hypothesis

🔗 buff.ly/xtRwbvO

4 months ago 14 6 0 0

Excited to share that my lab is moving to HKU @swimshku.bsky.social early next year! Really looking forward to working with great colleagues in the Baker, Schunter, Mcilroy, Gaitan and Russell labs, @bonebraking.bsky.social, @jonscibulski.bsky.social and others in the School of Biological Sciences

5 months ago 6 0 1 1
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Here, we show that deep below, corals and feather stars don’t just share space – they share microbes. Endozoicomonadaceae + Nitrosopumilaceae inhabit both hosts in a “promiscuous” symbiosis that may fuel nitrogen cycling in the deep sea.
doi.org/10.1186/s401... 🌊🪸🧪 #Bioinformatics 🧬💻 #SymbioSky

5 months ago 37 14 0 0
Join Us!

The Brown and Stachowicz labs are looking for a postdoc for an NSF-funded project on the thermal dependence of disease in eelgrass! As a bonus you get to be based at the Bodega Marine Lab! Interested? Find out more here: brown-ecology.com/join-us/

5 months ago 24 28 0 2

The sponge-ctenophore debate was one of the first that excited me as an undergrad. It’s so cool to still see new papers coming out on the topic!

5 months ago 4 1 1 0

"Our data are exquisite. Our world is empty."

An amazing piece on the coral reefs of the future by Rick MacPherson.

5 months ago 16 8 0 0
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bluesky Global Ecology Feed Digest #38 Curated digest of the bluesky Global Ecology feed on biodiversity, ecosystems & conservation at large scales. Terrestrial, freswater & marine realms.

🌐 Global Ecology feed Digest #38, Nov 3-10, 29 posts!

✨For the lazy (yes we are!) & friends who don't like social media but might benefit from this feed, here’s a DIGEST crafted with 💚 for you to share

👉 globalecologybs.github.io/feeddigest.g...

DM if you want to receive the link weekly

🌍🦤🦑🪴🍁🧪

5 months ago 12 2 0 0
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🦭 New study reveals overlooked intraspecific variation in prey quality and its influence on predator energy budgets. By identifying key ecological drivers, they emphasize the need to integrate such variability into bioenergetic models.

Read the full paper here! ➡️ buff.ly/vecdcwH

5 months ago 5 3 0 0
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The hitchhiker’s guide to cross-species DNA delivery Microbial hitchhikers are rewriting the rules of horizontal gene transfer. He, Patkowski, et al. reveal how phage satellites assemble chimeric infective particles that deliver DNA across species bound...

The hitchhiker’s guide to cross-species DNA delivery

@cp-trendsmicrobiol.bsky.social Spotlight by Kotaro Kiga and Rodrigo Ibarra-Chávez

www.cell.com/trends/micro...

5 months ago 45 15 0 1