GEOquery The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray data. Given the rich and varied nature of this resource, it is only natural to want to apply BioConductor tools to these da...

#GEOquery is a @bioconductor.bsky.social package that allows us to acquire data from NCBI's Gene Expression Omnibus, which is why we should be thankful to @seandavi.bsky.social for keeping it up to date.
For more details, visit:
bioconductor.org/packages/3.2...

Besides learning #BASH, I explored #R packages such as #tidyverse, #ggplot2, #DESeq2, #GEOquery, #org.Hs.eg.db, #clusterProfiler, #EnhancedVolcano, #celldex, #pheatmap, and #pathview, which open doors to further exploration of #RNASeq data. #Bioinformatics #RProgramming #Linux

Besides basic #RProgramming ( #tidyverse · #ggplot2 · #DESeq2 · #GEOquery · #org.Hs.eg.db · #clusterProfiler · #DoubletFinder · #EnhancedVolcano · #celldex · #pheatmap · #SingleR · #pathview) for #RNASeq · advanced packges #Seurat · #SeuratExtend · #monocle3 open new insight into #SingleCellAnalysis