StrainInfo—the central database for linked microbial strain identifiers Abstract. Throughout scientific literature and databases, microbial strains are often distinguished using either non-standardized designations or one of se

❗New publication📑

Read all about #StrainInfo - the central database for linked microbial strain identifiers 🧫🖥️

👉 academic.oup.com/database/art...

#DSMZDigitalDiversity #science 🧪 #databases #FAIRdata @nfdi4microbiota.bsky.social 🧬

👉 Join the #NFDI4Microbiota Conference 🦠 and learn how to identify strain designations in literature and sequence metadata by leveraging the #StrainInfo API 🖥️🧬 and libraries in #Workshop7.

DataCite Bright Spots — Metadata Game Changers The DataCite community includes repositories that have overcome obstacles that the whole community faces to create metadata that are very complete for four FAIR use cases. Over 3000 DataCite repositor...

#StrainInfo 🧫 is mentioned as a Bright Spot for its #FAIR DOI metadata 🖥️📊 in this Metadata Game Changers blog post!

👉 metadatagamechangers.com/blog/2025/6/...

#FAIRdata #database #DSMZDigitalDiversity #microbiology

Only a few days until #VAAM2025 🥳

Meet us at booth 23! 👩‍🔬👨‍🔬

… and don’t miss the DSMZ posters and lectures 😉

#DSMZDigitalDiversity #BacDive #LPSN #SILVA #StrainInfo #synbio @dsmzd3.bsky.social

VAAM promotional picture

Just two weeks until #VAAM2025 🦠🤩

Meet us at the @leibniz-dsmz.bsky.social booth 👋 or at the following posters and talks 👩‍🏫:

Poster P-CM-103 (Monday): #BacDive
Poster P-MDE-143 (Monday): #LPSN
Poster P-OT-346 (Tuesday): #SILVA
Presentation (Monday lunch symposium): #StrainInfo

StrainInfo

New #StrainInfo 🧫 release with data and interface updates 🖥️!

Read about it and try it out 👇
straininfo.dsmz.de/news

DataCite StrainInfo Metadata Analysis This report is part of the deliverables produced by PID4NFDI, a core service for persistent identifiers developed within the German National Research Data Infrastructure (Nationale Forschungsdateninfr...

Learn more about #persistentidentifiers from our four #PID use case analyses.
2️⃣ Check out our metadata analysis of the #StrainInfo database of the #NFDI consortium NFDI4Microbiota: doi.org/10.5281/zeno...
@nfdi4microbiota.bsky.social @leibniz-dsmz.bsky.social @dsmz.bsky.social #LoveData25 #RDM

📌 Save the break: Meet the DSMZ experts and ask your questions! Booth 03
👇

#DSMZDigitalDiversity #database #FAIRdata #nomenclature #taxonomy #NagoyaProtocol #BacDive #StrainInfo #DSMZCellDive #LPSN #MediaDive
@dsmzd3.bsky.social

📌 Save the break: Meet the DSMZ experts and ask your questions!
👇

#IUMS2024 #DSMZDigitalDiversity #database #FAIRdata #nomenclature #taxonomy #NagoyaProtocol #BacDive #StrainInfo #DSMZCellDive #LPSN #MediaDive
@dsmzd3.bsky.social

🖊️ Register for the NFDI4Microbiota conference and attend our workshop "Resolving microbial strain identifiers with #StrainInfo" 🧫 on the Thursday!

Using ROR for Funder Identification Several widely used scholarly systems are using ROR IDs to identify and disambiguate funders. In this post, we’ll give you a glimpse of how and why these systems use ROR IDs for funder identifiers.

📊"The largest provider of ROR IDs in DataCite funding references is a repository called StrainInfo".

📰Read about how #StrainInfo uses ROR IDs in DOI metadata in @researchorgs.bsky.social 's newest blog post. 👇

#DSMZDigitalDiversity #database #microbiology 🧫 🧪

ror.org/blog/2024-08...

A StrainInfo strain page

📣 StrainInfo update!

The #StrainInfo website now features strain availability statuses 🦠, autocomplete search and strain-level aggregated search results 🖥️.

The sequence section 🧬 was cleaned up and more than 25,000 new accessions were added to the database.

straininfo.dsmz.de/news

Have you tried out the new #StrainInfo yet?

We are ending our #DGHMVAAM2024 trip with an introduction to StrainInfo during the @nfdi4microbiota.bsky.social 🦠 session on Wednesday starting at 12:45 in Room 13.

Just one week until #DGHMVAAM2024 🦠👩‍🏫

Mark your conference plans and meet us! 👋

Poster P-MDE-003: #DSMZDigitalDiversity
Presentation OP-PMD-002: #PhageDive
Presentation IT-064: #StrainInfo
Presentation OP-MDE-002: #StrainRegistry
Poster P-MDE-002: Standardizing strain data

#biology #databases

Another opportunity to hear our short introduction to #StrainInfo 🦠.

#DSMZDigitalDiversity #microbiology #NFDI4Microbiota

New tutorial online: How to use APIs to automatically retrieve data from the DSMZ Digital Diversity databases #StrainInfo, #BacDive and #MediaDive
👉 www.youtube.com/watch?v=utcq5G9xtbk
 
#DSMZDigitalDiversity #biodiversity #database #data #research #taxonomy #metadata

The development of #StrainInfo 🧫 was an #NFDI4Microbiota 🦠 use case and the database will soon be integrated into the #NFDI4Microbiota web portal.

You can already find the database at straininfo.dsmz.de

#DSMZDigitalDiversity #biology

A graphical abstract describing the workflow of the Use Case Strain-ID from collection of lose strain data sets from multiple sources that are put into StrainInfo database to get curated strain data.

Struggling with microbial strain comparisons and identification? Explore our NFDI4Microbiota Use Case Strain-ID! Resolve culture collection numbers, match strains effortlessly, and streamline your research. Visit tinyurl.com/yt2h6sm3 for more info!

#Microbiology #StrainInfo #NFDI4Microbiota

🖥️ New video tutorial!

The recording of our workshop on how to use the web services to automatically retrieve data from #StrainInfo 🧫, #BacDive🦠 and #MediaDive🧪 is now online.

www.youtube.com/watch?v=utcq...

#FAIRdata #databases @nfdi4microbiota.bsky.social #DSMZDigitalDiversity #biology

Update available! New #NFDI4Microbiota services are online! Learn more about the knowledge base, #ARUNA, #StrainInfo and #VirJen during our online Community workshop on February 5, 2024. Zoom login information: Meeting ID 687 5464 7684, Passcode: 363736