A follow up, you can fetch Organism DB objects straight from AnnotationHub! The `orgdb` Python package makes querying annotations efficient and easy.
repo: github.com/BiocPy/orgdb
#biocpy #orgdb
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A follow up, you can fetch Organism DB objects straight from AnnotationHub! The `orgdb` Python package makes querying annotations efficient and easy.
repo: github.com/BiocPy/orgdb
#biocpy #orgdb
Seamlessly access R/Bioconductor annotations in Python!
The new "txdb" package lets you load standard TxDb SQLite databases and work with genomic features as native #BiocPy `GenomicRanges` objects.
Try it: `pip install txdb`
docs: github.com/BiocPy/txdb
If you're building Python pipelines for genomics, check out GenomicRanges. For feature requests or feedback, reach out to us on GitHub!
Try it: `pip install genomicranges`
Contribute: github.com/BiocPy/Genom...
#BiocPy