With Sven zur Oven-Krockhaus, @luiselotterausch.bsky.social & Klaus Harter we wrote an #ExpertView on #sptPALM in #plants ๐ฑ (focus: #plasmamembrane).
โ๏ธ Our goal: help you get started with this powerful method ๐
โ Curious? Weโll be happy to get you ready!
Opus Magnum by @loreoliv.bsky.social on the role of DnaA in bacterial DNA replication initiation building on fancy combinations of #sptPALM, proteomics, flow cytometry, genetics, and other techniques. Great collab with the Staals lab and many others. Long ๐งต๐
Excited to share our #bioRxiv #preprint on HIR2, RLKs and membrane organisation in #Arabidopsis. We used many exciting techniques like #sptPALM, #AlphaFold and #BN-PAGE ๐ฑ
Presenting our research to the Bsky Community โ Part II! ๐ฑ๐ฌ
Check out our #bioRxiv #preprint on #Dual-Color #sptPALM in #Arabidopsis ๐ฑ! Using #PA-GFP & #PATagRFP, we enable simultaneous tracking of two proteins in living plant cells! ๐จ๐
๐ Read more: tinyurl.com/2vcry74m
Four different figures showcasing strip plots, scatter plots, and box plots of synthetic #sptPALM data
#Python, #Seaborn & #Pandas is growing on me. Some synthetic data to plot average diffusion coefficients etc of tracks in individual bacterial cells (independent repeats of different conditions). #sptPALM is hard. Getting there @jmakela.bsky.social + @loreoliv.bsky.social
The best resource for #microscopy is among us on BlueSky! Savior of my #sptPALM designs
This week will hopefully bring the answer to the very important question whether mMaple3 is more photostable than PAmCherry2 in E. coli #sptPALM. Can't wait. @loreoliv.bsky.social
Fast dynamics in #sptPALM? Log-scale to the rescue. Three state model for Cas9 diffusion in <E. coli>.
graphical user interface for a simulation
nice plots
Playing with a GUI for #sptPALM simulations and #Python #Seaborn
Reading of a turbidostat showing stability over 100 hours.
8+ turbidostats in a row.
Some colleagues bought some #pioreactors for our next set of #sptPALM experiments. Stable for 100+ hours and you can exchange as much buffer as you like after reaching threshold (saw tooth). Excellent value for money it looks like.
New preprint spear headed by the amazing #LorenzoOlivi: "The Escherichia coli replication initiator DnaA is titrated on the chromosome" using, among many other techniques, #sptPALM to determine growth dependent mobilities of DnaA diffusing in live cells. doi.org/10.1101/2024.10.07.617004 1/n