We're hiring! Two fully funded PhD positions are open in my group at KTH/SciLifeLab, both in the intersection between machine learning, mass spectrometry, and proteomics. One EU MSCA-funded, one DDLS. Details below 👇
We are hiring! The Matthias Mann Lab @mannlab.bsky.social @mpibiochem.bsky.social in Munich has 3 exciting #postdoc openings in proteomics & computational biology. #MSProteomics #PostDoc
postdocprogram.mpg.de
Beyond Delta Masses: MS Andrea Directly Resolves Combinatorial Peptide Modifications in Open Searches www.biorxiv.org/cont...
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#proteomics #prot-preprint
An FWF grant will support a new method to study gene activity and proteins at single-cell resolution. The funding is awarded to a collaborative project led by Manuel Matzinger (Proteomics Technology Hub of IMP, IMBA, GMI) & Viktoria Dorfer (Research Center Hagenberg).
If you are interested in this highly attractive position, please contact us as soon as possible. We will be conducting the first interviews shortly.
www.imp.ac.at/career/open-...
2 PhD positions re opened in the ProtAIomics MSCA Doctoral Network
Interested in AI, proteomics, and international doctoral training?
👉 Check the details and apply via the ProtAIomics website www.protaiomics.eu
#Proteomics #ArtificialIntelligence #MSCA #PhDOpportunities #FullyFundedPhD
Nobody should have to sacrifice their identity by submitting selfies or personal documents in order to be an Android Developer.
Last 2 weeks to submit your abstract for Swiss Proteomics Meeting 2026!
📅 23–24 Apr 2026 | Bern
Talks by Anne-Ruxandra Carvunis (ETH Zurich) and Jesper Olsen (Univ. of Copenhagen).
Abstracts due 22 Feb
More info: buff.ly/xyQYBzd...
3/3 If one still wants to produce reliable software which needs significant review if vibe coded, the net gain isn't actually that big (and that is not including ethical AI concerns, cognitive loss, and the price jacking that is coming in the next years).
2/3 As a software engineer it just makes me code faster, but review takes significantly longer and errors are harder to catch.
1/3 My general take is, that vibe coding is mostly powerful and enabling for people who are not proficient with coding - which is especially dangerous because they can't judge when code is wrong unless it has immediately visible effects.
At least one person (the developer) has verified the code of a non-"vibe coded" package. How many "authors" of vibe coded tools will have read and understood the entirety of the produced codebase? Also review of code can be a lot harder then writing code.
It is my great honor to announce that registration for the 7th ESCP Single Cell Proteomics Conference is now open: lnkd.in/e4iyiQjf
With around 250 participants, it is one of the largest SCP conferences worldwide. We are also proud to announce that there is no participation fee for our conference.
🧪 Online (Zoom)
📅 23 April 2026
⏰ 14:00–16:00 CEST
✅ Free registration is mandatory!
👉More information in comments!
🔗 ECR Day Registration: docs.google.com/forms/d/e/1F...
🔗 Science Slam Registration: docs.google.com/forms/d/e/1F...
#Proteomics #EarlyCareerResearchers #YPIC #EuPA#EuBIC
Applications are now open for @olgavitek.bsky.social 's May Intitute on computation and statistics for mass spectrometry and proteomics at @northeasternu.bsky.social !
--> computationalproteomics.khoury.northeastern.edu
Join us for the #Ubiquitin & Friends Symposium 2026, April 29-30, in Vienna!
Fantastic guest speakers👇 & many slots for talks from abstracts, flash-talks & posters. Lots of opportunities to network. Register now to save your spot!
➡️ www.protein-degradation.org/symposium/
#ubfriends2026
PhD position reopened in ProtAIomics DN
🔗 Project details:
www.protaiomics.eu/project/dc12...
👩🔬 Meet the PI:
www.protaiomics.eu/supervisor/v...
👉 Apply here:
www.protaiomics.eu/call-for-app...
#PhDposition #MSCA #Bioinformatics #Proteomics #ArtificialIntelligence #DoctoralTraining #ResearchCareers
Finnish Proteomics Society has opened the early bird registration for the 2026 Finnish Proteomics Symposium 🥳
Don’t miss this opportunity to share your research, connect with leading experts, and explore the latest advancements in proteomics in picturesque surroundings of Nuuksio National Park.
Unified down-stream analysis of crosslinking mass spectrometry results with pyXLMS www.biorxiv.org/cont...
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#proteomics #prot-preprint
Unified down-stream analysis of crosslinking mass spectrometry results with pyXLMS www.biorxiv.org/content/10.64898/2025.12...
⏱️ Ten days left. Time flies, so apply now 👉 www.protaiomics.eu
Don’t miss your chance to join ProtAIomics and a vibrant international community in AI powered proteomics.
#ResearchCareers #Proteomics #ArtificialIntelligence #MSCA #PhDOpportunities #FullyFundedPhD
Congratulations to my research partners at the Proteomics Tech Hub at the @impvienna.bsky.social on their newest publication on the optimization of crosslinking on the Orbitrap Astral! Happy that I was able to contribute! 🥳
www.nature.com/articles/s41...
New paper alert! Researchers at the Proteomics Tech Hub at the @viennabiocenter.bsky.social have developed a new cross-linking mass spectrometry workflow that allows scientists to more easily detect and study protein interactions that were previously undetectable. More: bit.ly/4nV5n1w
Do you teach #rstats? Do your students complain about how lame and old-fashioned dplyr is? Don't worry: I have the solution for you: github.com/hadley/genzp....
genzplyr is dplyr, but bussin fr fr no cap.
Register now! Five days of keynotes, workshops, flash talks, posters, and more on computational mass spectrometry Confirmed keynote speakers Armin Soleymaniniya · Arthur Declercq · Claire Koenig · Hannah Boekweg · Jonas Scheid · Karel Berka · Matthias Anagho-Mattanovich · Roman Bushuiev · Valdemaras Petrosius 📆 19-23 January 2026 📍 Harrachov, Czechia
Registration is now open for the EuBIC-MS Winter School 2026!
Join us in Harrachov, Czechia for a week of keynotes, workshops, and networking on computational MS.
Info and registration: eubic-ms.org/events/2026-...
#EuBIC2026 #MassSpectrometry #MassSpec #Bioinformatics #Proteomics #Metabolomics
Last week we had our yearly organizational meeting, this time in Vienna, Austria. We had 3 great days discussing the activities of the past year and planning the upcoming ones. Thanks to everyone who joined and contributed to a great meeting!
The 6th European Symposium on Single Cell Proteomics took place on Campus this week, once again drawing a big international crowd eager to experience interesting talks, poster presentations, networking & knowledge exchange!
Enjoy these snapshots and make sure to sign up next year!
#viennabiocenter
Also, I know that in DIA-NN there is a "threads" parameter that can be set, for the i9 that should be at least at 24 (and the OS hopefully schedules that to be each on separate cores). Maybe that helps :)
Haha pretty sure they'd be happy to hear about it though. As a dev I can confirm that it's hard to keep track of all the changes in the hardware world ;)
Might be because the software maybe isn't adapted to properly use all the cores in the new Intel CPUs yet? E.g. no more hyper threading on Intel CPUs and if it only uses performance cores there will be a huge performance loss compared to Ryzen CPUs. Probably worth asking the devs.