We now have two confirmed keynote speakers for the EuBIC-MS Hackathon 2027. We are looking forward to welcoming @tineclaeys.bsky.social and Eric Deutsch!
Find more information about the event and submit your hackathon proposal here: eubic-ms.org/events/hacka...
On the 15th of April we will host a seminar as part of our ProteoBench hackathon in Copenhagen. Swing by and hear more about Protebench, EuBIC and other interesting projects!
Find details here: eubic-ms.org/events/lates...
See you there! 😄
Latest developments and tools for data analysis
EuBIC Seminar 2026 Event Schedule for Wednesday the 15th April 2026 Location is in the Mærsk tower at Panum on the 15th floor in the seminar room 7.15.52...
📢 Mark your calendars!
We’re excited to announce the EuBIC-MS 2027 Hackathon!
📍 Gimo, Sweden
📅 31 January – 5 February 2027
💡 Have a hackathon idea?
The call for topic proposals is now open on the EuBIC GitHub repository: github.com/EuBIC/EuBIC2...
We’re looking forward to seeing you there!
We are happy to share that the preprint for Proteobench is available now on biorxiv!
Check it out here: www.biorxiv.org/content/10.6...
Congratulations and thanks to everyone involved for the great effort!
Early bird registration for the #EuBIC2026 Winter School has been extended until 10 December 2025. Register now!
#Proteomics #MassSpectrometry #Bioinformatics
Poster on EuBIC-MS at the poster session
At the snowy #HUPO2025 in Toronto? ❄️
Come and join us tonight for a chat at the #FriendsOfHUPO poster session. You'll find us right in front of the Frontenac Ballroom.
Join us for the Bioinformatics Hub Session about Proteobench next week at this years @hupo-org.bsky.social World Congress in Toronto!
Big shout out to @eupaproteomics.bsky.social and the Czech Society for Mass Spectrometry (CZMS) for making this event possible, and to @denbi.bsky.social and @matrixscience.bsky.social for sponsoring!
Register now! Five days of keynotes, workshops, flash talks, posters, and more on computational mass spectrometry Confirmed keynote speakers Armin Soleymaniniya · Arthur Declercq · Claire Koenig · Hannah Boekweg · Jonas Scheid · Karel Berka · Matthias Anagho-Mattanovich · Roman Bushuiev · Valdemaras Petrosius 📆 19-23 January 2026 📍 Harrachov, Czechia
Registration is now open for the EuBIC-MS Winter School 2026!
Join us in Harrachov, Czechia for a week of keynotes, workshops, and networking on computational MS.
Info and registration: eubic-ms.org/events/2026-...
#EuBIC2026 #MassSpectrometry #MassSpec #Bioinformatics #Proteomics #Metabolomics
Last week we had our yearly organizational meeting, this time in Vienna, Austria. We had 3 great days discussing the activities of the past year and planning the upcoming ones. Thanks to everyone who joined and contributed to a great meeting!
Today at 16:00 CEST we're having our monthly online meeting to discuss our projects and oncoming events. Everyone is welcome to join!
If you're new to EuBIC-MS, join 15 mins earlier today for a quick tour of EuBIC-MS!
To join, go to eubic-ms.org/become-a-mem... and find the meeting URL on Slack.
Conference stage with Marie Locard-Paulet, the chairs, and the opening slide in the background.
Marie Locard-Paulet presenting the EuBIC-MS #ProteoBench project at the #EuPA2025 conference.
👉 Learn more about our open proteomics software benchmarking platform at proteobench.readthedocs.io.
#Proteomics #Bioinformatics #Benchmarking
Big thanks to our three speakers for their great talks: Julian Uszkoreit (@uszkoreitju.bsky.social), Yannic Chen, and Harikrishnan Ramadasan (@harirmds.bsky.social).
Also a big thanks to everyone who attended and participated in the discussion session!
#EuPA2025 @eupaproteomics.bsky.social
EuBIC-MS session at EuPA 2025 Tuesday June 17, 10:15 - 12:00, Room Vauban 1 Ralf Gabriels Introducing EuBIC-MS 10:15 - 10:30 Julian Uszkoreit O85 - What can we gain - a comparison of common search engines and post-processing methods 10:30 - 10:45 Yannic Chen O84 - Benchmarking Database Search Engines for DDA-based Immunopeptidomics 10:45 - 11:00 Harikrishnan Ramadasan O86 - Bridging expert curation and LLMs for automated metadata extraction in lesSDRF 2.0 11:00 - 11:15 Interactive discussions on open challenges in computational proteomics 11:15 - 12:00
Join us in Saint-Malo for the #EuBIC-MS session at #EuPA2025!
After a short introduction, we have three exciting talks lined up, as well as an interactive discussion on open issues in computational proteomics.
@eupaproteomics.bsky.social @uszkoreitju.bsky.social @harirmds.bsky.social
And big thanks also to the @eubic-ms.org hackathon team contributing to our #SpectriPy package github.com/RforMassSpec... !
Next on the list submission of the package to 👉 @bioconductor.bsky.social
Thanks to the incredible work of @enryh.bsky.social, now #quantms is part of #ProteoBench. You can benchmark DDA LFQ data within ProteoBench using proteomicLFQ (#OpenMS algorithm) using quantms and ProteoBench. #OpenData #OpenSource @eubic-ms.org 🔥🚀
proteobench.readthedocs.io/en/stable/av...
Got a brilliant keynote speaker in mind? We're collecting suggestions for the EuBIC‐MS Winter School 2026 in the Czech Republic next January. Share your ideas now: forms.gle/6Y1ibMuezEB1...
#EuBIC2026 #TeamMassSpec #ProteomicsSky
This year's Developers Meeting ended less than a month ago, but we are already looking for a location for the next one! Would you like to propose a location for the Developers Meeting in 2027?
Make your suggestion here before the 7th of March:
github.com/EuBIC/EuBIC2...
Group picture of all EuBIC2025 participants in front of snowy pine trees. Captioned "EuBIC-MS Developers Meeting 2025, Neustift Abbey, Italy, 2-7 February 2025, Sponsors: de.NBI, Matrix Science, and Biognosys. Powered by EuPA"
The EuBIC-MS Developers Meeting 2025 was a blast! Thanks to all participants, hackathon organizers, EuPA, and especially our sponsors: @denbi.bsky.social, @matrixscience.bsky.social, and @biognosys.bsky.social.
#EuBIC2025
@denbi.bsky.social supports this week the @eubic-ms.org Developer Meeting 2025 at Abbey of Neustift, Vahrn (IT).
Audience in lecture hall
Pavel Sinitcyn presenting
Katerina Nastou presenting
Will Fondrie presenting
The EUBIC-MS Developers Meeting 2025 in Brixen is off to a great start with keynotes by Pavel Sinitcyn, Katerina Nastou, and @willfondrie.com.
#EuBIC2025
🚨 Big news, #TeamMassSpec! 🚨
How do we unlock proteomics data reuse, tackle metadata challenges, and harness public (clinical) data for AI?
Find out at HUPO-PSI Spring Meeting 2025!
📅 March 31 – April 3, 2025
📍 Tübingen, Germany
(1/4)
In hopes that I won’t get lost en route to the EuBIC-MS developers meeting in Feb, I’ve started learning Italian with Duolingo. 🇮🇹
Fantastico! Un cornetto e un caffè, per favore 🥐 ☕️
I’m super excited and I think I have the essentials learned 😂
Have you ever noticed how benchmarking #proteomics data analysis can be a wild west?
EuBIC-MS community members did, and started #ProteoBench: An open platform for comparing proteomics data analysis workflows.
Learn more at the webinar (27 Feb, 18h CET) Register here: bit.ly/3SfS4Lf
Ben, Ben, and guest Micha recording the podcast
Recording the podcast before a live audience.
Thumbnail for The Proteomics Show, Live from Winterberg
A first time for a EuBIC-MS event: The live recording of a podcast. @benneely.com and @proteomicsnews.bsky.social just recorded an episode of The Proteomics Show live from Winterberg at the #EuBIC2024 Winter School🎙️❄️
Listen now: podcasters.spotify.com/pod/show/the...
Not sure how much of EuBIC is actually on Bluesky, but @magnuspalmblad.bsky.social has a feed for the conference to capture the hashtag. Get it!
Thomas Burger presents remotely at the EuBIC-MS Winter School 2024
Cecilia Lindskog presenting at the EuBIC-MS Winter School 2024
Ben Neely presenting at the EuBIC-MS Winter School 2024
After the educational day with hands-on tutorials, day 2 of the #EuBIC2024 Winter School started with great keynotes by Thomas Burger, Cecilia Lindskog, and @benneely.com.
EuBIC Winter School 2024 Five days of keynotes, workshops, flash talks, posters, and more on computational mass spectrometry 15-19 January 2024 @ Winterberg, Germany https://www.eubic-ms.org/events/2024-winter-school Keynote speakers: Ben Neely, Cecilia Lindskog, Dirk Valkenborg, Juan Antonio Vizcaino, Laurent Gatto, Nils Hoffmann, Niveda Sundararaman, Robbin Bouwmeester, Thomas Burger, Wen-Feng Zeng Special guest: Ben Orsburn Sponsors: MSAID, Evosep, Matrix Science, Bioinformatics Solutions Inc Powered by: EuPA, PROTrEIN, de.NBI
Today is the last day to:
🐦 Register with extended early bird
📃 Submit an abstract for a flash talk / poster
for the #EuBIC2024 Winter School on computational mass spectrometry.
Check out the full program on eubic-ms.org/events/2024-...
#teammassspec #proteomics #compms
EuBIC Winter School 2024 Five days of keynotes, workshops, flash talks, posters, and more on computational mass spectrometry 15-19 January 2024 @ Winterberg, Germany https://www.eubic-ms.org/events/2024-winter-school Keynote speakers: Ben Neely, Cecilia Lindskog, Dirk Valkenborg, Juan Antonio Vizcaino, Laurent Gatto, Nils Hoffmann, Niveda Sundararaman, Robbin Bouwmeester, Thomas Burger, Wen-Feng Zeng Special guest: Ben Orsburn Sponsors: MSAID, Evosep, Matrix Science, Bioinformatics Solutions Inc Powered by: EuPA, PROTrEIN, de.NBI
Only four more days for early bird registration for the #EuBIC2024 Winter School ⏲️
Registration info on eubic-ms.org/events/2024-...