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Posts by Stefano Ghignone

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Make this April 22 #UnderEarthDay

How can you help? See: buff.ly/msi7bbR

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A global call to protect life belowground and conserve the underground fungal networks that sustain life aboveground.

🎵 Cosmo Sheldrake

1 day ago 22 6 0 4
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#MIRRI-IT closing event, 19/03/2026
Cavallerizza Reale, Turin, Italy 🇮🇹

#Research #Infrastructure for the #preservation, #systematic #investigation, #provision and #valorisation of #microbial resources and #biodiversity.

1 month ago 0 0 0 0
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AI-tools to study fungal effector function introduced by ⁦‪@ahbucknell.bsky.social‬⁩ #Fungal26 #FungalAI @thesainsburylab.bsky.social

1 month ago 25 9 1 0
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@grafana.bsky.social and @prometheus.io #monitoring #dashboard being installed on all my machines! Pure rock!

#grafana #prometheus #nerd #ITsolutions #linux #docker

2 months ago 2 1 0 0

Let's celebrate researchers of mycorrhizas! Several awards for a variety of career stages offered by the IMS. Pls see links below

2 months ago 5 2 0 0
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Join the Fungal Biodiversity Course at the Westerdijk Fungal Biodiversity Institute and explore the amazing diversity of fungi through hands-on experience.

👩‍🔬 Discover, identify, and explore the fungal world!
https://wi.knaw.nl/CourseFungalBiodiversity

2 months ago 1 1 1 0
Course at EMBL-EBI. Data science for life scientists: hands-on machine learning for biological data. 15 – 19 June 2026. Hinxton, UK. EMBL's European Bioinformatics Institute logo.

Course at EMBL-EBI. Data science for life scientists: hands-on machine learning for biological data. 15 – 19 June 2026. Hinxton, UK. EMBL's European Bioinformatics Institute logo.

During 'Data science for life scientists' you will get hands-on training on:
– APIs and Python
– Data preprocessing and visualisation
– Core machine learning methods
– Deep learning approaches
– Large language models

Applications are open until 1 March 2026: www.ebi.ac.uk/training/eve...

🧬🖥️📊

2 months ago 6 7 1 0
Workshop "Microbial Ecology and Evolution"

Workshop "Microbial Ecology and Evolution"

🎯 Workshop "Microbial Ecology and Evolution"
🏦 Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università di Torino, Viale P.A. Mattioli 25, 10125, Torino, Italia
⏲️ February 6th, 2026

#Microbial #Ecology #Evolution #symbiosky

2 months ago 0 0 0 0

The 3D Genome of Gigaspora margarita Unveils Stable Chromatin and Nucleolar Organization and Symbiont-Dependent Genome Dynamics www.biorxiv.org/content/10.64898/2026.01...

3 months ago 1 1 0 0
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I ❤️ this little #dell guy so much 🥰

Powered by #DietPi can smoothly run #n8n and #Pi-Hole

#wyse3040 #nerd #supernerd

3 months ago 0 0 0 0
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Image taken from Creative Commons slide dec in What happens when you choose closed? webinar 09July 2025. Creative Commons Licence Term Options
Attribution (BY): Credit must be given to you, the creator.
ShareAlike (SA): Adaptations must be shared under the same terms.
NonCommercial (NC): Only noncommercial use of your work is permitted, not primarily intended for monetary compensation.
NoDerivatives (ND): No derivatives or adaptations of your work are permitted.
CCBY has the most freedoms followed by CC-BY-SA, CC-BY-NC, CC-BY-ND, and CC-BY-NC-ND as the least freedom

Image taken from Creative Commons slide dec in What happens when you choose closed? webinar 09July 2025. Creative Commons Licence Term Options Attribution (BY): Credit must be given to you, the creator. ShareAlike (SA): Adaptations must be shared under the same terms. NonCommercial (NC): Only noncommercial use of your work is permitted, not primarily intended for monetary compensation. NoDerivatives (ND): No derivatives or adaptations of your work are permitted. CCBY has the most freedoms followed by CC-BY-SA, CC-BY-NC, CC-BY-ND, and CC-BY-NC-ND as the least freedom

🎓 Not all open licences are created equal!

Taylor Campbell from @creativecommons.bsky.social broke down key licence types👇

🔓 Most freedom: CC BY
⛔️ Least: CC BY-NC-ND

Your licence = your reuse rights. Choose wisely to boost impact & reach!

#ChooseOpenWebinar for live updates 💡
#MedLib #PhDsky

9 months ago 7 2 0 1
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🚀InterPro 107.0 is live!
✨Updated to Pfam 38.0
✨1,068 new InterPro entries
Explore the latest annotations and discover new protein insights.
Explore it now: interpro.ebi.ac.uk

5 months ago 6 5 0 0
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🎊 Congratulations Donato and Maria!🏅

#CNR #cnr_ipsp #Xylella
#Xylella_fastidiosa
#olive #Puglia

www.cnr.it/it/nota-stam...

4 months ago 0 0 0 0
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Origin and function of beneficial bacterial symbioses in insects Nature Reviews Microbiology - In this Review, Kaltenpoth et al. examine the evolution and function of beneficial symbioses between bacteria and their insect hosts, focusing on their effects on the...

📚Reading note:
Kaltenpoth, M., Flórez, L.V., Vigneron, A. et al. Origin and function of beneficial bacterial symbioses in insects. Nat Rev Microbiol 23, 551–567 (2025).
rdcu.be/eUK7j

#review #symbioses #insects #bugs
#SymbioSky

4 months ago 0 0 0 0
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while #coding with #R and playing with #GitHub, this is one big satisfactions when it appears on the top of README 🚀

4 months ago 0 0 0 0
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when you code over weekend and results are f*ck*ng awesome!!

#R #claude #perplexity
#TrEMBLE #uniprot #proteomes #taxonomic_divisions #fungi

4 months ago 2 0 0 0
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Professor Maarja Öpik valiti mullateaduse valdkonna akadeemikuks Eesti teaduste akadeemia valis 3. detsembril mullateaduse valdkonna akadeemikuks Tartu Ülikooli ökoloogia ja maateaduste instituudi direktor ja molekulaarse ökoloogia professor Maarja Öpik.

Congratulations to New Phytologist's Editor-in-Chief, Maarja Öpik, on being elected to the Estonian Academy of Sciences!

omi.ut.ee/et/uudis/pro...

4 months ago 16 2 0 0
PhD Scholarships in Agricultural Robots and Software for Sustainable Farming Imagine a world where food production is in harmony with natural processes, farmers nurture healthy soils, and biodiversity thrives. In contrast, current monoculture farming systems undermine this…

📢PhD Scholarships in Agricultural Robots and Software for Sustainable Farming at University of Southern Denmark
The application deadline is December 8, 2025
fa-eosd-saasfaprod1.fa.ocs.oraclecloud.com/hcmUI/Candid... #PlantSciJobs #DigitalTwins

4 months ago 2 1 1 0
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🧪 Submit your abstract for #EESSymbiosis and get the chance to present your research, receive qualified feedback and help develop our understanding of the complexities of symbiotic function.

You have until 25 Nov: https://s.embl.org/ees26-03-bl

🗓️ 17 – 20 Mar 2026
📍 EMBL Heidelberg and Virtual

5 months ago 10 4 0 1
Graphics providing the following information: "Webinar at EMBL-EBI. From bench to database: the journey of a UniProt entry. 11 December 2025, 15:00-16:00 GMT. Speaker: Michele Magrane, EMBL-EBI". A photo of the speaker is provided close to the name.

Graphics providing the following information: "Webinar at EMBL-EBI. From bench to database: the journey of a UniProt entry. 11 December 2025, 15:00-16:00 GMT. Speaker: Michele Magrane, EMBL-EBI". A photo of the speaker is provided close to the name.

Join us for our upcoming webinar next week, where we will trace the journey of protein data from the lab bench and scientific literature into the UniProt Knowledgebase.

Registration is free but essential:
www.ebi.ac.uk/training/eve...

🖥️🧬

4 months ago 4 4 0 0
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Hand-drawn botanical illustration of red-capped mushrooms labeled Amanitopsis pulchella, with additional dried mushroom specimens and handwritten notes on a beige paper background.

Hand-drawn botanical illustration of red-capped mushrooms labeled Amanitopsis pulchella, with additional dried mushroom specimens and handwritten notes on a beige paper background.

Ever seen fungal illustrations? 🍄 Our Fungarium Sequencing Project Team is thrilled to show some of the original illustrations that were created when the species were first described as new to science. In some cases, this is the only visual reference material of the original fungus that we have! 🧵👇

4 months ago 43 13 1 1
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⏰Don't miss this chance to showcase your research and chat with an incredible group of soil experts!

Late-breaking poster submissions for #GSBC2026 are due on January 30, 2026!

Submit your abstract here: globalsoilbiodiversity2026.org/abstract/

4 months ago 7 9 0 0
Ten simple rules for defining a computational biology project

💎Hidden jewel from the past

📖Checkout this article I found at PLOS: dx.plos.org/10.1371/jour...

#CompBio
#ComputationalBiology
#Bioinformatics
#ResearchDesign
#ProjectPlanning
#ReproducibleResearch
#TenSimpleRules
#PhDLife
#AcademicWriting

4 months ago 0 0 0 0
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A Quick Guide to Organizing Computational Biology Projects

💎Hidden jewel from the past

Checkout this article I found at PLOS: dx.plos.org/10.1371/jour...

#CompBio
#ComputationalBiology
#Bioinformatics
#ResearchWorkflow
#DataManagement
#Reproducibility
#VersionControl
#ElectronicLabNotebook
#BestPractices

4 months ago 1 0 0 0
Soil-dwelling microarthropods and fungi: combined indicators of ecosystem health in mediterranean agroforestry systems

🚀New study on #soil #fungi🍄 & #microarthropods🪳 as #bioindicators in Mediterranean agroforestry
🌱 Diversity shifts with grazing intensity revealed.
Tool for sustainable land & climate resilience.
📖Read more: rdcu.be/eQUO7

#Agroforestry #SoilHealth #Biodiversity #Sustainability
#CNR-IPSP #CNR-IBE

5 months ago 3 2 0 0
Genomic traits associated with pathogenicity.

Genomic traits associated with pathogenicity.

Lifestyles shape genome size and gene content in fungal pathogens.
buff.ly/tec1Tds

5 months ago 8 3 1 1
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Warm greetings from #Turin!
#ATP #NittoFinals #Tennis

5 months ago 0 0 0 0
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Ignoring non‐English‐language studies may bias ecological meta‐analyses Ignoring non-English-language literature may bias outcomes of ecological meta-analyses, due to systematic differences in effect sizes between studies published in English and non-English languages.

Ignoring non-English-language studies may bias ecological meta-analyses. onlinelibrary.wiley.com/doi/full/10....

5 months ago 8 2 0 0
https://www.mdpi.com/3572660

https://www.mdpi.com/3572660

Worried if your research is reproducible? You should be!

Our new editorial in Horticulturae shares tips for transparent methods, detailed protocols, and reproducible workflows using R/Python—not Excel!

🚀Read it here: www.mdpi.com/3572660

#reproducibility #openscience #datarigour #scicommunity

5 months ago 0 0 0 0
Redirecting

🚀 New paper out!
doi.org/10.1016/j.ij...
Thanks to the #teamwork between #CNR #IPSP (plant & soil biology) and #STIIMA (textile engineering), we’ve shown how #chitosan and #natural_dyes influence #cotton fabric #biodegradation in compost-rich #soil.🌱🧪

#GreenScience #Collaboration #Biomaterials

10 months ago 0 0 0 0
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