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Posts by Neha Ghosh

Normal neuro-vascular maps of the macular inner-retina.
Top half clinical imaging: Topographic analyses from 96 normal eyes for OCT thickness (Trinh et al., 2022b) and 57 normal eyes for OCTA signal (Trinh et al., 2021a), with exclusion of any retinal macular/optic nerve pathology. Common locations of the optic nerve head and retinal blood vessels were excluded from OCT scans (Burke et al., 2024a, 2024b; Tong et al., 2020; Trinh et al., 2020, 2021b, 2022b). OCT layers are depicted on the left using a standardised thickness scale (darker green = greater thickness), while OCTA slabs are depicted on the right using a standardised OCTA signal (darker red = greater OCTA signal). Vascular slab approximations were adapted from Campbell et al. (Campbell et al., 2017). For reference, the RPE-BM (drusen layer) is shown using OCT thickness, and the choriocapillaris is shown using OCTA signal.
Bottom half histological imaging: Resin embedded, 100 nm serial section of mid-peripheral retina of aged, normal human eye (87 year old male) with amino acid immunolabelling of GABA, glycine, and glutamate mapped to the red, green, and blue colour channels, respectively, and rod opsin labelling indicated in yellow. The section illustrates the laminar organisation of the inner- and outer-retina for cross-reference with the OCT layers above and the distinct neurochemical signatures of neurons in these layers. White scale bar 100 μm.
RNFL, retinal nerve fibre layer; GCL, ganglion cell layer; IPL, inner plexiform layer; INL, inner nuclear layer; OPL, outer plexiform layer; ONL, outer nuclear layer; IS/OS, photoreceptor inner- and outer-segments; RPE-BM, retinal pigment epithelium to Bruch's membrane.

Normal neuro-vascular maps of the macular inner-retina. Top half clinical imaging: Topographic analyses from 96 normal eyes for OCT thickness (Trinh et al., 2022b) and 57 normal eyes for OCTA signal (Trinh et al., 2021a), with exclusion of any retinal macular/optic nerve pathology. Common locations of the optic nerve head and retinal blood vessels were excluded from OCT scans (Burke et al., 2024a, 2024b; Tong et al., 2020; Trinh et al., 2020, 2021b, 2022b). OCT layers are depicted on the left using a standardised thickness scale (darker green = greater thickness), while OCTA slabs are depicted on the right using a standardised OCTA signal (darker red = greater OCTA signal). Vascular slab approximations were adapted from Campbell et al. (Campbell et al., 2017). For reference, the RPE-BM (drusen layer) is shown using OCT thickness, and the choriocapillaris is shown using OCTA signal. Bottom half histological imaging: Resin embedded, 100 nm serial section of mid-peripheral retina of aged, normal human eye (87 year old male) with amino acid immunolabelling of GABA, glycine, and glutamate mapped to the red, green, and blue colour channels, respectively, and rod opsin labelling indicated in yellow. The section illustrates the laminar organisation of the inner- and outer-retina for cross-reference with the OCT layers above and the distinct neurochemical signatures of neurons in these layers. White scale bar 100 μm. RNFL, retinal nerve fibre layer; GCL, ganglion cell layer; IPL, inner plexiform layer; INL, inner nuclear layer; OPL, outer plexiform layer; ONL, outer nuclear layer; IS/OS, photoreceptor inner- and outer-segments; RPE-BM, retinal pigment epithelium to Bruch's membrane.

New publication: Inner-Retinal Changes In AMD: Evidence, Mechanisms, and Future Perspectives.
A fun project with Matt Trinh, Michael Kalloniatis, myself, Glenn Yiu, Enrico Borrelli, and Lisa Nivison-Smith
bryanwjones.com/2026/03/inne...

3 weeks ago 22 8 0 2
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Adhesion to a common ECM mediates interdependence in tissue morphogenesis in Drosophila - EMBO Reports Organ functionality requires the precise coordination of diverse tissues during development. Halfway through Drosophila embryogenesis, two lateral epidermal sheets stretch to fuse at the dorsal midlin...

Yay! Our paper is now out @emboreports.org! I posted about it a while back (tinyurl.com/yc7td3px) but the work really improved thanks to the wonderful feedback from three anonymous reviewers 🙏 (1/4)

2 weeks ago 27 11 4 0
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Zebrafish finds Nemo. New paper with our great collaborators on gap junctional communication in widely divergent species.

www.nature.com/articles/s41...

2 weeks ago 37 15 2 1
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🧵 New preprint led by @bingbrunton.bsky.social, @elliottabe.bsky.social, @lawrencehu.bsky.social

We gave a worm brain control of a fly body and it walked

What did we learn? Nothing, other than deep reinforcement learning is effective

We call it the digital sphinx

www.biorxiv.org/content/10.6...

4 weeks ago 397 147 9 27

Are you a postdoc in the job market? Do you have a cool story in the making? You forgot to have lunch and just run your gel backwards? You can't sleep because of the prospect of applying to 100 places and getting two replies only? Apply! 🧪🐟https://www.germanfishmeeting.org/from-postoc-to-pi

4 weeks ago 41 16 2 2
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Our new paper is now out in @jexpbiol.bsky.social!!! We had all sorts of fun generating LED stimuli for mosquitos to investigate their visual preferences in the presence of different odors. The paper is open access and available here: journals.biologists.com/jeb/article/...

9 months ago 38 14 2 2
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Excited to share our new article, ‘Mechanical regulation of cuboidal-to-squamous epithelial transition in the Drosophila developing wing’, now online in Current Biology.
doi.org/10.1016/j.cu...

There’s also a great accompanying Dispatch:
doi.org/10.1016/j.cu...

#MatrixMechanics #DevBio

4 weeks ago 30 13 2 0

💃💃💃

4 weeks ago 1 0 0 0
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Thank you 😊

4 weeks ago 1 0 0 0

Thank you so much, Stefan!

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Thanks for the warm words, Shefali! 🎉

4 weeks ago 1 0 1 0
Chitin organization during corneal lens morphogenesis. Top row: apical surfaces of wild-type (white1118) mid-pupal retinas stained for chitin with chitin-binding domain probe CBD (green) and E-Cadherin and N-Cadherin (magenta). From left to right, the times are 48 h after puparium formation (APF), 50 h APF, 51 h APF, 52 h APF, and 54 h APF. Middle row shows enlargements of single ommatidia. Bottom: Diagram of chitin (green) organization during corneal lens development. CC, cone cells; 1º, primary pigment cells; 2º, secondary pigment cells; 3º, tertiary pigment cells; B, mechanosensory bristles.

Chitin organization during corneal lens morphogenesis. Top row: apical surfaces of wild-type (white1118) mid-pupal retinas stained for chitin with chitin-binding domain probe CBD (green) and E-Cadherin and N-Cadherin (magenta). From left to right, the times are 48 h after puparium formation (APF), 50 h APF, 51 h APF, 52 h APF, and 54 h APF. Middle row shows enlargements of single ommatidia. Bottom: Diagram of chitin (green) organization during corneal lens development. CC, cone cells; 1º, primary pigment cells; 2º, secondary pigment cells; 3º, tertiary pigment cells; B, mechanosensory bristles.

How does the #corneal #lens in the #fly eye get its light-focusing shape? @nehaghosh.bsky.social &co show that central cells produce large amounts of #chitin to form the thick central corneal lens; peripheral cells produce smaller amounts to form tapered lens edges @plosbiology.org 🧪 plos.io/4lLNgeY

4 weeks ago 28 11 0 1
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Hello epithelia enthusiasts!

I’m @inesfournon.bsky.social and I study epithelial mechanics in sea anemones 🪼

Did you know epithelial cell extrusion had never been described outside bilaterian animals before? Well… not anymore 👀

Read ⬇️🧵1/9

4 weeks ago 53 23 1 3

Huge congratulations 🎉

1 month ago 1 0 0 0
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Geraldine Seydoux @hhmi-science.bsky.social @jhu.edu and co-workers show that germ granule component PGL-3 undergoes #RNA independent #phaseseparation driven by structured domains that oligomerize and interact with RGG motifs.

-> link.springer.com/article/10.1...

1 month ago 6 3 0 0

Yaaassssss 💃 💃 💃

1 month ago 1 0 1 0
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Curvature of the Drosophila corneal lens depends on localized chitin secretion How does the corneal lens in the fly eye acquire its light-focusing shape? This study shows that centrally located cells produce large amounts of chitin to form the thick central corneal lens, while p...

I am excited to share my new paper in @plosbiology.org . Here we show the role of chitin, a polysaccharide, in controlling the shape of the fly corneal lens.

journals.plos.org/plosbiology/...

1 month ago 40 22 3 0

1st McKinley Lab grad student’s 1st preprint!
@claireang.bsky.social studied how the uterus safely excises massive amounts of tissue during menstruation and pregnancy.

Come for her GORGEOUS images, stay for her incredible discoveries.
www.biorxiv.org/content/10.6...
w/ @akelleher1017.bsky.social

1 month ago 127 33 8 1

Gorgeous! Looks like a bouquet of flowers…

1 month ago 2 0 0 0
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Drosophila Neurobiology: Genes, Circuits & Behavior Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.

Can't wait to serve again as co-director of the CSHL Drosophila Neurobiology course this year! 🧪🪰👀
Application Deadline: March 27
meetings.cshl.edu/courses.aspx...
@cshlnews.bsky.social
@cshlcourses.bsky.social

3 months ago 25 14 1 1
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Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis Gene expression patterns underlie development, but their systematic detection in whole embryos has remained elusive. We introduce a whole-embryo imaging platform using multiplexed error-robust fluores...

Very happy to see this out. 👏 @yinanwan.bsky.social
Bogdan Bintu and team.
Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis | free link Science www.science.org/eprint/5MHTM...

1 month ago 181 77 6 8
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Enhancer-gene specificity in development and disease Summary: This Review discusses recent insights into the factors controlling enhancer specificity and how this might help us understand the genetic basis of human disease.

Enhancers are genetic regions that promote the activation of neighbouring genes. @radaiglesiaslab.bsky.social asks how long-range enhancers maintain specificity by constructing synthetic gene landscapes and exploring how they affect gene activity. #gfe2026

Alvaro's @dev-journal.bsky.social Review⤵

1 month ago 7 6 1 0
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Quick plug for our new resource, the Drosophila Species Stock Exchange. This is a database and mailing list that documents species currently in culture and the labs holding them. If you want to know more or sign up then please get in touch. See attached for more info and please share!

1 month ago 47 50 6 1

Excited to be presenting my work at #ASBMB26 on how glucose metabolism interacts with mTor signaling in #Drosophila in the Integrated Metabolism session on March 9 at 2.50 pm in the Cherry Blossom room.

It's my first time attending #ASBMB and we are having a wonderful time here in DC ☺️

1 month ago 7 2 0 0
Picture of Sarah

Picture of Sarah

Talk slide title with images of testis defects

Talk slide title with images of testis defects

If you're at #Dros26 and are interested in how cells change shape & move during morphogenesis & how different classic cadherins influence different cell behaviors, check out the talk by @saraheclark.bsky.social in Cell Biology: Cytoskeleton, Organelles, & Trafficking II Sat 9:15 🧪

1 month ago 41 14 0 1

Me too 😭

1 month ago 1 0 0 0
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Excited to share our work at #DROS26!

I’ll be giving a talk today at 11 AM in the Patterning, Morphogenesis, and Organogenesis session.

Also come check out posters from our lab: Elizabeth (F 2-4 pm), Debbie (S 1:30-3:30 pm)

1 month ago 8 3 0 0

Best wishes for your talk, Shefali!

1 month ago 1 0 1 0

Many congratulations to you! 🎉

1 month ago 2 0 1 0
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New preprint out!
In this study, we introduce NanoFLex, a strategy that combines #HaloTag variants with #nanobodies -based immunolabeling to enable rapid, OneStep-IF #lifetime #multiplexing. Possible due to SmartSecondaries fused to #HaloTag from @nanotag.bsky.social: www.biorxiv.org/content/10.6...

1 month ago 73 37 1 3