🚨Don't miss this Resource published now at Nature Cancer, as part of the #HTAN initiative!
'A cellular and spatial atlas of TP53-associated tissue remodeling defines a multicellular tumor ecosystem in lung adenocarcinoma'
✏️By Alexander Tsankov and colleagues
🔗 www.nature.com/articles/s43...
New HTAN data is now available on ISB-CGC!
Explore the latest updates and check out our new Python notebook, which demonstrates how to merge metadata across modalities in HTAN using Google BigQuery.
#HTAN #BioData #BigQuery #ISBCGC
github.com/isb-cgc/Comm...
This work was led by the very talented @ohsunews.bsky.social Ph.D. student Raphael Kirchgaessner with contributions from others not on social media. This work is also part of the NCI #HTAN 2/
Featured today by @MSKLibrary: Sharing data from the Human Tumor Atlas Network through standards, infrastructure and community engagement dx.doi.org/10.1038/s415...
#HTAN #CancerData #OpenScience #DataSharing
#Bioinformatics #CancerResearch
A new Perspective outlines the datasets, data standards, infrastructure, governance and community engagement approaches of the Human Tumor Atlas Network. #HTAN
www.nature.com/articles/s41...
Dark times at NIH, but today's first steering committee for Phase 2 of #HTAN reminds us what's at stake. Brilliant cell atlas teams forging ahead, mapping cancer in unprecedented detail. New working groups in viz, compute & translation and outreach will be beacons of light.
Leaders of the Human Tumor Atlas Network are answering questions from the audience related to #HTAN research and resources. www.cancer.gov/about-nci/or... @natureportfolio.bsky.social
He is also describing HTAN Data Jamborees that bring scientists together to build unique solutions that solve relevant problems in #CancerResearch using #HTAN data and tools. data.humantumoratlas.org/jamboree
Dr. Ken Lau is sharing that Human Tumor Atlas Network data and resources are available to the community in the #HTAN Data Portal. data.humantumoratlas.org
The importance of #HTAN work in advancing the understanding of cancer evolution and the macro-environment of tumors is being described by Drs. Li Ding and Ken Lau.
www.nature.com/collections/...
Drs. Li Ding and Ken Lau are discussing unmet needs in #CancerResearch that are being addressed by #HTAN.
Dr. Li Ding is discussing how we can think about tumor atlases like Google Maps that allow us to explore the landscape of cancer at the cellular and tissue level. #HTAN
Dr. Shannon Hughes, Deputy Director of the NCI Division of Cancer Biology is describing #HTAN, which is constructing 3D atlases of the cellular, morphological, molecular, and spatial features of human cancers (and their surrounding microenvironments) over time. www.cancer.gov/about-nci/or...
The Chief Editor of Nature Cancer is kicking off the Human Tumor Atlas Network (HTAN) exploring tumor evolution in time and space webinar. www.nature.com/collections/... #HTAN @natureportfolio.bsky.social
🚨Don't miss The #HTAN live webinar later today!
🔗 workcast.com/register?cpa...
With HTAN leaders: Li Ding, Ken Lau, Shannon Hughes and Michael Snyder
Chaired by: Alexia-Ileana Zaromytidou (Chief Editor, Nature Cancer)
Produced by: Nature/Nature Portfolio
🔬✨ Exciting advancements in #cancerresearch ! @theNCI -funded research from the Human Tumor Atlas Network (#HTAN) is providing new insights into tumor biology, including development, spread, and treatment responses.
Learn more:...
#HTAN release 6 data is now live in #BigQuery! Check out the new tables using our BigQuery Table Search tool at bit.ly/BQTableSearch and filter Program by HTAN
#CancerMoonshot
A new NCI HTAN notebook demonstrates how to create a Cancer Data Services (CDS) data import manifest using Google #BigQuery. Check out this notebook and more at bit.ly/HTAN_notebooks
#CancerMoonshot #CancerResearch #HTAN
Check out the new NCI HTAN notebook, Analyzing HTAN #scRNASeq Data Using CellTypist! This notebook shows users how #HTAN single cell data can be annotated with #CellTypist. Find out more at bit.ly/HTAN_notebooks
@NCICancerBio #CancerMoonshot #CancerResearch #singlecell #RNAseq
#HTAN release 5 data is now live in #BigQuery! New tables include cell spatial imaging data and updated clinical and file metadata. Check out the new tables using our BigQuery Table Search tool at bit.ly/BQTableSearch and filter Program by HTAN #CancerMoonshot
A new NCI HTAN notebook was added to our Community Notebooks! It illustrates how to use the #HTAN clinical and biospecimen #BigQuery tables to identify precancer cases and specimens. Find the notebook at bit.ly/HTAN_notebooks
#CancerMoonshot #CancerResearch
Graph of the Spatial distribution of tumor cells in an Invasive Melanoma region
A new notebook was added to our Community Notebooks in collaboration with NCI HTAN! The notebook demonstrates how to use #BigQuery Geospatial Analytics to analyze #HTAN spatial data. Check the notebook out at bit.ly/HTAN_notebooks
@NCICancerBio
#CancerMoonshot #CancerResearch
