📣 We're pleased to announce the reintroduction of the taxonomy restriction feature.
Sequence searches can now be restricted to specific taxonomic groups, allowing more control over which species are included in the results.
#bioinformatics #hmmer #proteins

📣 We’re pleased to announce the release of jackhmmer.
It’s now available for use, and we’d greatly value any feedback as we continue to improve the tool.

www.ebi.ac.uk/Tools/hmmer/...
Give it a try and share your thoughts!

#bioinformatics #hmmer

Protein Sequence Domain Annotation using Language Models Protein function inference relies on annotating protein domains via sequence similarity, often modeled through profile Hidden Markov Models (profile HMMs), which capture evolutionary diversity within ...

#Pfam #hmmer #LLMs #ProteinDomains

www.biorxiv.org/content/10.1...

HMMER

Let us know if you spot any HMMER issues with #BUSCOv3 when you update your #HMMER http://hmmer.org/download.html to version 3.2 (available since June)