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Posts by Adaptive Evolution Lab

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Variable Genetic Architecture Limits Cross‐Range Genomic Prediction of Functional Traits in Invasive Common Ragweed (Ambrosia artemisiifolia) Functional trait expression is a potentially powerful predictor of invasion success, but the reliability of trait-based predictions across populations depends on the consistency of genetic architectu...

📣New paper out📣: Cross‐range portability of genomic prediction may teach us something about evolutionary processes. That's particularly interesting for globally invasive plants, so check it out: onlinelibrary.wiley.com/doi/abs/10.1...

2 weeks ago 1 0 0 0
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Bridging developmental and statistical approaches to variation and evolution | PNAS Phenotypic variation is the raw material for evolutionary diversification and adaptation. However, a critical gap remains in evolutionary theory be...

How does development shape the variation evolution can act on?

In our new paper in @pnas.org , we bridge developmental dynamics and quantitative genetics, linking dynamical models of phenotype formation with the statistical parameters used to study evolutionary change

www.pnas.org/doi/10.1073/...

1 month ago 81 33 2 2

There are good initiatives focusing on training and leadership @UM6P (agc.um6p.ma) and @Stellenbosch's CERI (genomics.africa). Fruiting will take time but seeds were planted.
Here is the blueprint paper from previous workshops: www.nature.com/articles/s41...

1 month ago 9 2 0 0
Image features photo of Edmund Albius

Image features photo of Edmund Albius

At just 12 years old, Edmond Albius discovered hand-pollination of vanilla orchids making global vanilla cultivation possible.🌺

#BlackHistoryMonth #PlantReproduction

2 months ago 34 9 0 0
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A small polymerase ribozyme that can synthesize itself and its complementary strand The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...

Why hasn't this paper gotten more attention?

2 months ago 34 15 5 1
Details - Research Associate – Plant Phenotyping, La Trobe University Jobs at La Trobe University

Interested in plant phenotyping, hyperspectral imaging and ML-driven data analysis?
Then apply and join us.
@latrobeuni.bsky.social
#APPN
#hypetspectral
#plantphenotyping

internaljobs.latrobe.edu.au/cai/en/job/5...

2 months ago 1 1 0 0
Photo of 9 slime mold sporangia that look like tiny, orange hot air balloons lined up in a somewhat disorderly row. The sporangia are on dark coloured, dead wood with bright green moss behind them.

Photo of 9 slime mold sporangia that look like tiny, orange hot air balloons lined up in a somewhat disorderly row. The sporangia are on dark coloured, dead wood with bright green moss behind them.

Slime mold, Trichia decipiens in front of bright green #moss. NWT, Canada.
#myxomycete #fungifriends
The slime mold is about 0.5cm high.

2 months ago 1557 145 26 7
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Globally, no single day in 2025 was cooler than its 1991-2020 average.
climate.copernicus.eu/global-clima...

3 months ago 1012 683 21 72

Naming my first variable $joe, and the next $jane…

3 months ago 0 0 1 0
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It's this time of the year when we are happy to celebrate the new graduates from the AdaEvo lab! Congratulations to Dr Andhika R. Putra, Ana Krteska, MSc and Tiffany Gong, MSc!

4 months ago 4 0 0 0
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A circadian transcriptional subnetwork and EARLY FLOWERING 3 control timing of senescence and grain nutrition in bread wheat Circadian clocks control daily and seasonal timing of physiology and development. Because of their influence on photoperiodic flowering, variants in circadian clock genes have been selected for ph...

I’m very pleased to share our latest work, led by the talented @cbuckley.bsky.social as part of his PhD. It’s our first attempt at studying #circadian rhythms in wheat with the help of some great collaborators @jesshyles.bsky.social @adaevo.bsky.social et al. #plantsci 🌾⏰ 1/7
doi.org/10.1111/nph....

6 months ago 12 8 1 0
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🌱 Using ‘compelling’ methods, including #CryoET, researchers mapped spinach thylakoid membranes at single-molecule precision, revealing how photosynthetic complexes are organised and settling long-standing debates on chloroplast architecture.
buff.ly/j3TSIkn

6 months ago 41 9 1 2
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Homepage - Population, Evolutionary, and Quantitative Genetics Conference Visit our website to learn more.

Save the date! #PEQG26 June 9-12 2026 in Asilomar, CA. Happens only every 2yrs, but is my favorite conference. Full website coming soon, and registration and abstract submission opens November 14, but I'm allowed to tease that keynotes will be @jnovembre.bsky.social @jennytung.bsky.social and me!

7 months ago 64 43 2 1
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Among the Academies: Studying How Plants Adapt How can plants adapt to their environment, and how will they be able to adapt to climate change? Those are among the biggest questions Johanna Schmitt has sought to answer during her career as a plant...

A nice profile of the wonderful Annie Schmitt

www.ucdavis.edu/news/among-a...

7 months ago 53 21 2 1
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Out after peer review, collaborative study from Nordborg & Weigel labs with help from many others. Not the largest collection of new Arabidopsis thaliana genomes, but we hopefully put forward some good ideas for how to think about pangenomes and their analysis!
www.nature.com/articles/s41...

8 months ago 146 73 1 0

Same here… I often ask to print the Arabic word for dick when error-catching… 🙈

10 months ago 1 0 0 0
myloasm - metagenomic assembly with (noisy) long reads

Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).

myloasm-docs.github.io

10 months ago 132 78 5 3
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How to deal with our own poison: How plant genomes regulate deleterious genetic elements? A seminar by Dr Taiko To (School of Life Science & Technology, Institute of Science Tokyo)

tinyurl.com/48yt9ary

11 months ago 1 0 0 0
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To address the underrepresentation of women in our School’s genetics program and pursuant to a special measure under Section 12 (1) of the Equal Opportunity Act 2010 (VIC), this position is only open to female-identifying candidates.

11 months ago 2 0 0 0
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Details : Lecturer / Senior Lecturer / Associate Professor in Genomics : The University of Melbourne Careers at The University of Melbourne

The School of BioSciences at the University of Melbourne is recruiting a female-identifying genomicist in a teaching and research academic role. Come and work with us!
jobs.unimelb.edu.au/en/job/92007...

11 months ago 5 7 1 0
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Australian Chief Plant Protection Officer Webinar: Biosecurity Commons | ARDC Learn about Biosecurity Commons - an open-access, cloud-based platform for modelling and analysing biosecurity risk and response.

Learn about @biosecuritycommons.bsky.social at a webinar hosted by Australia's Chief Plant Protection Officer, Dr Gabrielle Vivian-Smith!
📅 Tues 25 March, 2pm AEDT
✍ Add the event to your calendar via this link:
ardc.edu.au/event/austra...

#NCRISimpact #biosecurity

1 year ago 3 6 0 0

Please explain?

1 year ago 0 0 1 0
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Details : Lecturer or Senior Lecturer in Biotechnology : The University of Melbourne Careers at The University of Melbourne

The School of BioSciences at the University of Melbourne is recruiting a continuing academic (level B/C) in Biotechnology.
This is a research and teaching role.
Come join us!
jobs.unimelb.edu.au/en/job/91875...

1 year ago 3 10 1 0

Thanks for voicing that, don’t keep quiet.

1 year ago 1 0 0 0
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Trait genetic architecture and population structure determine model selection for genomic prediction in natural Arabidopsis thaliana populations Abstract. Genomic prediction applies to any agro- or ecologically relevant traits, with distinct ontologies and genetic architectures. Selecting the most a

📣 New Paper out!!! 📣
When is ML outperforming good old parametric regression for genomic predictions? Go check 👇

doi.org/10.1093/gene...

1 year ago 6 2 0 1

Cool in freezer first 😎

1 year ago 1 0 1 0
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A lot of pangenome graph at #PAG32

1 year ago 0 0 0 0

While the per capita consumption of olive oil has remained steady (increasing with population), the consumption of kiwis or pistachios has seen its rise alongside population growth. Interestingly, increased fruit and vegetable consumption is often associated with economic improvement.

1 year ago 0 1 0 0
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The genome of Citrus australasica reveals disease resistance and other species specific genes - BMC Plant Biology Background The finger lime (Citrus australasica), one of six Australian endemic citrus species shows a high natural phenotypic diversity and novel characteristics. The wide variation and unique…

📢 New publication 'The #genome of Citrus australasica reveals #disease resistance and other species specific genes' by Upuli Nakandala, Agnelo Furtado, Ardashir Kharabian Masouleh, Malcolm Smith, Darren Williams and Robert Henry in BMC Plant Biology.

1 year ago 6 1 1 0
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Controlling the frequency dynamics of homing gene drives for intermediate outcomes Abstract. Gene drives have enormous potential for solving biological issues by forcing the spread of desired alleles through populations. However, to safeg

Gene drives can have non-trivial intermediate behaviours in a population. We better model it to get it right!
academic.oup.com/g3journal/ad...

1 year ago 3 1 0 0