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Posts by CompBioPhys

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Join our #webinar tomorrow

"Multiscale simulation of biomembranes: shape, structure and cellular function"
🗓️ 14 April 2026, 15:00 CET
✍️ bioexcel.eu/y50u

#ComputerSimulation #moleculardynamics
@weria-lab.bsky.social

1 week ago 3 2 0 0
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We are looking for an #IT expert to join our department @mpi-nat.bsky.social in #Göttingen 🇩🇪 as #SysAdmin or #HPC infrastructure manager! More details in our current job offer 🔗 www.mpinat.mpg.de/5238050/13-2... Is it you?🧐 Please apply! 📩 #joboffer #job #openposition

2 weeks ago 0 0 1 0
Job advert for MD related research projects in the department of theoretical and computational biophysics @mpi-nat.bsky.social

Job advert for MD related research projects in the department of theoretical and computational biophysics @mpi-nat.bsky.social

🧐 You are a physicist or chemist who wants to reveal how life works at the molecular level?

🤓 You know how to combine computer power and theory to solve biological problems?

❤️ You just love doing science?

👉 Send us your application!
🔗 Current job adverts www.mpinat.mpg.de/grubmueller

2 months ago 7 6 0 0

👉 #webinar @bioexcelcoe.bsky.social on characterising dynamic #protein interfaces with DynaPIN #software #today

2 weeks ago 1 0 0 0

👉 Another excellent @bioexcelcoe.bsky.social #webinar today!

3 weeks ago 2 0 0 0
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Save the date 📅: @horizonsmolbio.bsky.social Symposium 2026
Look forward to an international conference from Sep 7 to 10 at our institute – you can expect exciting scientific presentations from fields such as cell biology, structural biology, bioinformatics, neuroscience, genomics, and immunology. 👇

1 month ago 5 5 1 0
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Impfstoffe und andere Medikamente werden zum Schutz oft in kleinen Fetttröpfchen verpackt, den sogenannten Lipid-Nanopartikeln. So werden sie von den Zellen aufgenommen und entlassen erst dann ihre Fracht. Um diesen Prozess zu optimieren, haben FAU-Forschende den Vorgang am Computer simuliert. (1/2)

2 months ago 11 2 1 0
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Following our "What's new in GROMACS 2026" webinar today we have another webinar in 2 weeks where we will focus on #GROMACS performance

🗓️ 17 March 2026, 15:00 CET
✍️ bioexcel.eu/oryy

#webinar #moleculardynamics
@gromacs.bsky.social

1 month ago 2 1 0 0

Don't miss the @bioexcelcoe.bsky.social #webinar TODAY!

😲 What's new in GROMACS 2026.0 🧐

1 month ago 2 0 0 0
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One pocket to activate them all (?): Efforts on understanding the modulator pocket in K2P channels The modulator pocket is a cryptic site discovered in the TREK1 (K2P2.1) K2P channel. This pocket, located close to the selectivity filter, accommodates agonists that enhance the channel’s activity....

🙂 Happy to share our contribution to improving the understanding of #ionchannels! In this review, the authors attempt to elucidate how the modulator pocket contributes to #K2P channel activation. #TREK1 #MD #C-type inactivation #ML335 #review @wojciechkopec.bsky.social

👉 doi.org/10.1080/1933...

1 month ago 0 0 0 0

📜 Here, we present a fully automated, perturbation-based optimization approach for #Gō networks, #PoGō, that iteratively refines a nonuniform #Gō network against a precomputed atomistic free-energy landscape in essential conformational space. 😲 It can also be used to optimize #ENMs. Happy reading!

1 month ago 0 0 0 0
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🎉Just appeared online in #JCTC @pubs.acs.org "Improving Conformational Ensembles of Folded #Proteins in #GōMartini" @maksimkalutskii.bsky.social @maxotubule.bsky.social @carterjwilson.bsky.social pubs.acs.org/doi/10.1021/...

1 month ago 5 2 1 0

👉 Don't miss your chance to get the latest news about GROMACS 2026 and join the @bioexcelcoe.bsky.social #webinar with Vedran, Lukas and Berk on March 3! @gromacs.bsky.social #MD #moleculardynamics

2 months ago 2 0 0 0
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🧐 Who will be presenting their #research projects during the upcoming #Theory #workshop in #Hünfeld? ⏩ Take a look at the program and list of #speakers. www.mpinat.mpg.de/workshop/hue... #Registration for 🖥️ online only participation is still open...

2 months ago 2 2 0 0

🎉Congratulations from your colleagues to this great honour, Annke! 👏 Indeed - we are very proud to keep Annke as PhD student in our department @mpi-nat.bsky.social ❤️More excellent research projects ahead...

2 months ago 3 0 0 0
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👉 Join our 'Computer Simulation and Theory of Macromolecules' #workshop in #Hünfeld 🇩🇪 to discuss recent advances in #theory and application of #biomolecular #simulations and contribute to promoting the exchange among the communities of Germany and beyond. #MD @mpi-nat.bsky.social t1p.de/d0lrv

2 months ago 7 3 0 0
PhD Student or Postdoc (f/m/x) for the project Theory and Algorithms for Structure Determination from Single Molecule X-Ray Scattering Images The Department of Theoretical and Computational Biophysics headed by Helmut Grubmüller is inviting applications for a PhD Student or Postdoc (f/m/x) in the field of Theory and Methods for Non-equilibrium Theory and Atomistic Simulations of Complex Biomolecules

📖 The full job advert providing further details on the #PhD and #Postdoc #positions are posted here 🔗 www.mpinat.mpg.de/5200782/02-2...

2 months ago 0 0 0 0
Single Molecule Ultrafast X-Ray Diffraction To investigate the applicability of this approach, we examine:

📜 More details about the research project including publications are provided here 🔗 www.mpinat.mpg.de/628848/SM-Ul...

2 months ago 0 0 1 0
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📩 Join our interdisciplinary team as #PhD student or #postdoc and contribute to the project "Theory and #Algorithms for Structure Determination from Single Molecule X-Ray Scattering Images", a new route to the structure determination of biomolecules. #job #XFEL in #Göttingen 🇩🇪
@mpi-nat.bsky.social

2 months ago 2 1 1 0
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Our #Bayesian #Markov approach may help to quantitatively explain similar nonintuitive #Braess-type #kinetics also in other enzymes where chemical/conformation coupling is essential. 👉 pubs.acs.org/doi/10.1021/...

2 months ago 0 0 0 0
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Braess’ Paradox in Enzyme Kinetics: Asymmetry from Population Balance without Direct Cooperativity The ATPase ABCE1, a member of the ubiquitous ATP-Binding Cassette protein superfamily, is essential in eukaryotic and archaeal ribosome recycling. It comprises a pair of homologous nucleotide-binding ...

📜 We present our most recent joint publication with Robert and Colin "Braess’ Paradox in Enzyme Kinetics: Asymmetry from Population Balance without Direct Cooperativity" in the Journal of Chemical #Theory and #Computation! #ATPase #enzyme #MarkovModelling 🔗 pubs.acs.org/doi/10.1021/...

2 months ago 1 0 1 0

🎉 In 2026 we will celebrate our special 25th Conference #Anniversary!! On this very occasion, this time we'll welcome 2️⃣ invited speakers! We are looking forward to the talks of Florian Müller-Plathe from Technical University Darmstadt and Jeremy Smith from Oak Ridge National Laboratory!

2 months ago 0 0 0 0
Hünfeld 2026: Workshop on Computer Simulation and Theory of Macromolecules Please note: Online registration is open until February 15, 2026

📅 Visit the workshop website www.mpinat.mpg.de/workshop/hue... and register online for on-site or online participation! Registration is open until Feb 15!

2 months ago 0 0 1 0

🎉Don't miss this excellent #job opportunity to join the #communication and #media #team @mpi-nat.bsky.social

2 months ago 2 0 0 0

⏩ Tomorrow! #webinar @bioexcelcoe.bsky.social

2 months ago 0 0 0 0
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Advanced Computational Methods in Protein Simulations: A Case Study of Enhanced Sampling Applied to Membrane Transporters We review the use of state-of-the-art enhanced sampling techniques in molecular dynamics (MD) simulations. We briefly introduce the principles and practical considerations underlying the application o...

Check out our latest review of advanced sampling of membrane transporter dynamics - link.springer.com/chapter/10.1...

Great work from Jon Colburn and @simonlichtinger.bsky.social !

2 months ago 14 6 0 1
Job advert for MD related research projects in the department of theoretical and computational biophysics @mpi-nat.bsky.social

Job advert for MD related research projects in the department of theoretical and computational biophysics @mpi-nat.bsky.social

🧐 You are a physicist or chemist who wants to reveal how life works at the molecular level?

🤓 You know how to combine computer power and theory to solve biological problems?

❤️ You just love doing science?

👉 Send us your application!
🔗 Current job adverts www.mpinat.mpg.de/grubmueller

2 months ago 7 6 0 0

🤗 In 2026 we will celebrate our special 25th Workshop Anniversary!! On this very occasion, this time we'll welcome 2️⃣invited speakers! We are looking forward to the talks of Florian Müller-Plathe from Technical University Darmstadt and Jeremy Smith from Oak Ridge National Laboratory!

2 months ago 0 0 0 0
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🎗️ reminder that our #webinar on "Mastering the Accelerated Weight Histogram method" will take place next week;

🗓️ 10 February 2026, 15:00 CET
✍️ bioexcel.eu/5t76

#moleculardynamics

2 months ago 3 2 0 0

🥸Don't miss this excellent @bioexcelcoe.bsky.social #webinar! News about #GROMACS @gromacs.bsky.social #MD #simulations #compchem

2 months ago 1 0 0 0