See how Novogene used long-read sequencing & hybrid assembly to build high-quality reference genomes in polyploid & large plant species (e.g. chrysanthemum, Torreya). Learn methods & breakthroughs. #PlantGenomics #LongRead #GenomeAssembly https://tinyurl.com/3yzjaef6
Interested in #GenomeAssembly & #GenomeAnnotation?
Join our March course to learn how to create high-quality, haplotype-phased genomes using Illumina, @pacbio.bsky.social @nanoporetech.com & more.
www.physalia-courses.org/courses-work...
#Genomics #Bioinformatics @vertebrategenomes.bsky.social
#Bioinformatics still a black box?
🧬 Join our Spring School in Bioinformatics online with @passdan.bsky.social & Christoph Hahn, 8–12 June!
Learn to handle NGS data—from Linux basics to #GenomeAssembly, #RNAseq, #Phylogenomics, #docker and much more.
www.physalia-courses.org/courses-work...
See how Novogene used long-read sequencing & hybrid assembly to build high-quality reference genomes in polyploid & large plant species (e.g. chrysanthemum, Torreya). Learn methods & breakthroughs. #PlantGenomics #LongRead #GenomeAssembly https://bit.ly/3VJkqjs
ChromoMapper: a new tool to quickly compare large genome assemblies. #GenomeAssembly #GenomeComparison #Bioinformatics #Genomics @bioinfoadv.bsky.social 🧪🧬 🖥️
academic.oup.com/bioinformati...
We’re heading to PAG 33! 🧬
📍 Booth# 322
Check out this Scientific Workshop:
From Genotype to Phenotype: Chromosome-Scale Assemblies
🗓️ Tue, Jan 13 | 1:30–3:40 PM
📍 Pacific D
Meet us or book time 👉 cantatabio.com/event...
#PAG33 #Genomics #GenomeAssembly #T2T #PlantGenomics
Reconstruct animal and plant genomes with our #denovosequencing services. Uncover genetic structure, novel genes, and evolutionary insights for #biodiversity and agriculture research. Learn more: https://bit.ly/3VJTeRR
#PlantGenomics #AnimalGenomics #GenomeAssembly #Agrigenomics #GenomicsInnovation
Congratulations @simrouxvirus.bsky.social
@maureenbug.bsky.social
@titus.idyll.org
@taylorreiter.bsky.social
@ucdavis.bsky.social on this fantastic publication, and thank you for this informative thread!
#NARGenomics #NARGAB #EditorsChoice #GenomeAssembly #Sequencing
Reconstruct microbial genomes with Novogene’s de novo sequencing services. Gain insights into genome structure, novel genes, and evolutionary relationships.
Learn more: https://bit.ly/49KQEAK
#DeNovoSequencing #MicrobialGenomics #GenomeAssembly #Microbiology #GenomicsResearch #Biotechnology
Explore how long-read sequencing advances polyploid and large genome assembly in plants. Gain insights into polyploid evolution, gene duplication, and genetic diversity.
Read more: https://bit.ly/3VJkqjs
#PolyploidGenomics #LongReadSequencing #PlantGenomics #GenomeAssembly #Agrigenomics
A phylogenetic estimate of canine retrotransposition rates based on genome assembly comparisons. #CanineGenomes #Retrotransposon #LINE1 #SINE #GenomeAssembly #GenomeEvolution #Genomics @biorxivpreprint.bsky.social 🧪🧬 🖥️
www.biorxiv.org/content/10.1...
Gap-free telomere-to-telomere genome assembly of marbled flounder (Pseudopleuronectes yokohamae). #T2T #GenomeAssembly #MarbledFlounderGenome #FlatFishGenomics #ScientificData
www.nature.com/articles/s41...
Haplotype-resolved assemblies provide insights into genomic makeup of the oldest grapevine cultivar (Munage) in China. #GrapevineGenome #GenomeAssembly #HaplotypeResolvedAssemblies #PlantGenomics @horticulturer.bsky.social 🧪🧬
academic.oup.com/hr/advance-a...
Targeted sequencing and iterative assembly of near-complete genomes. #TargetedSequencing #LongRead #Sequencing #LRS #GenomeAssembly @biorxiv-genomic.bsky.social 🧪🧬 🖥️
www.biorxiv.org/content/10.1...
My internship experience with assembling genomes and annotating them during a 6 week internship at Freiburg Galaxy.
galaxyproject.org/news/2025-07-22-ming-li-...
#UseGalaxy #GalaxyProject #EOSC #Bioinformatics #Genomics #GenomeAssembly #GenomeAnnotation #TrainingProgram (1/2)
The 2025/2026 CGEBM Bioinformatics Courses have been announced: #genomics Courses 1-2 days, taught in person (by me!), training in #Unix/cluster computing, #genomeassembly , #RNAseq , #microbiome, other applications of short read sequencing. Full details on CGEBMs training page: tinyurl.com/c5n9n6p4
The #GenomeAssembly course with @nanoporetech.com data is wrapping up! 🚀
A big thank you to our amazing instructors and all participants for an inspiring and informative week. 🙌
Interested in joining us? Keep an eye on our upcoming courses and workshops:
🔗 www.physalia-courses.org/courses-work...
Strong bias in long-read sequencing prevents assembly of Drosophila melanogaster Y-linked genes. #LongRead #Sequencing #GenomeAssembly #DrosophilaGenome #AssemblyBias #Ychromosome @genomeresearch.bsky.social
genome.cshlp.org/content/earl...
PAQman: reference-free ensemble evaluation of long-read eukaryotic genome assemblies. #GenomeAssembly #LongReads #AssemblyQC #AssemblyEvaluation #Bioinformatics #Genomics @biorxivpreprint.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
Explore new frontiers in genomics with Novogene’s de novo sequencing services. Achieve high-quality genome assemblies and unlock unique biological insights.
Learn more: bit.ly/3OX0GoT
#DeNovoSequencing #Genomics #GenomeAssembly #BiologicalResearch #NextGenSequencing
Explore how long-read sequencing advances polyploid and large genome assembly in plants. Gain insights into polyploid evolution, gene duplication, and genetic diversity.
Read more: bit.ly/3VJkqjs
#PolyploidGenomics #LongReadSequencing #PlantGenomics #GenomeAssembly #Agrigenomics
Autocycler: long-read consensus assembly for bacterial genomes. #LongRead #SequneceData #GenomeAssembly #ConsensusAssembly #BacterialGenomes #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...
If you're new to plant genomics research, don't miss the supplementary hands-on manual we included - it walks you through the major data analysis steps in a typical plant genomics project! ☘️ 🧬
#PlantScience #GenomeAssembly #OpenScience
Anchors for Homology-Based Scaffolding. #GenomeScaffolding #GenomeAssembly @biorxivpreprint.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
Join us Sept. 16–18 for a Virtual Genome Assembly Workshop! 🧬 Learn sequencing, assembly & QC—all from your laptop.
📅 10 AM - 2 PM EST
💻 Live on MS Teams + recordings
💰 $500 ($400 UConn affiliates)
Register: bioinformatics.uconn.edu/cbc-workshops/
#GenomeAssembly #Bioinformatics #Workshop
MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment. #GenomeAssembly #GenomeAnnotation #GenomeQuality #Genomics #Bioinformatics @biorxiv-bioinfo.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
Interested in #GenomeAssembly? Are you working with #longreads @nanoporetech.com data?
You can still join us for this great course with Natalie and Vesa from the @roslininstitute.bsky.social
Dates: online, 29 September-3 October
www.physalia-courses.org/courses-work...
Reconstruct animal and plant genomes with our #denovosequencing services. Uncover genetic structure, novel genes, and evolutionary insights for #biodiversity and agriculture research.
Learn more: bit.ly/3VJTeRR
#PlantGenomics #AnimalGenomics #GenomeAssembly #Agrigenomics #GenomicsInnovation
RAGA: a reference-assisted genome assembly tool for efficient population-scale assembly. #GenomeAssembly #ReferenceAssistedAssembly @horticulturer.bsky.social
academic.oup.com/hr/advance-a...
A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology. #T2T #KoiCarpGenome #GenomeAssembly #LongReads #HiC @gigascience.bsky.social
academic.oup.com/gigascience/...
