Client Challenge

For my #popgen nerds out there, I've finished building a Python package called hapnet - an easy to use, straight out the box tool for building #haplotype networks. Just plug your data in, run a single line of code and voila! A pretty color coded network. Still beta testing!
pypi.org/project/hapn...

Leishmania genomic adaptation: more than just a 36-body problem Genome instability has been identified as a major driver of adaptation in fast-growing, eukaryotic cells, including fungi, protists, or cancer. How these cells cope with the toxic effects caused by su...

Drs Gerald Späth, Laura Piel & Pascale Pescher discuss #Leishmania #genomic #adaptation: more than just a 36-body problem. #Genome #Instability #Haplotype #Selection #Phenotypic #Adaptation #Evolvability @pasteur.fr‬ @upcite.bsky.social

www.cell.com/trends/paras...

BonoboFlow is a Nextflow-based pipeline for end-to-end assembly and #haplotype reconstruction of viral genomes from ONT sequencing data.

In Horticulture Research, the study presents a high-quality, haplotype-resolved genome of Prunus zhengheensis, providing new insights into the genetic variations that enable the plant to survive in low temperatures.
#Apricot #Haplotype
Details: doi.org/10.1093/hr/u...

Welcome to our Genomics Word of the Day! This is a quick quiz to help you get to grips with complex #genomics terminology!

One word, three possible answers. Today’s word: #haplotype!

#biotechnology #bioinformatics #wordoftheday #transcriptomics #metagenomics #dna #rna #words #ngs

Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes We present a resource dataset of 189 long-read-sequenced tumors from advanced cancer patients. Long-read sequencing allows detection of a range of features not easily detectable with more conventional...

Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes. #LongRead #Sequencing #Cancer #StructuralVariants #Haplotype #Methylation #Genomics #Bioinformatics #BioSky #SciSky 🧪🧬🖥️
www.cell.com/cell-genomic...