Revolutionizing infectious disease surveillance: Multi-omics technologies and AI-driven integration

This review shows how #multiomics with #AI transforms #PathogenSurveillance, enabling biomarker discovery, outbreak prediction, and precision care, while tackling data bias, ethics, and advancing #OneHealth collaboration.

#OpenAccess: doi.org/10.1016/j.dc...

#MedSky #PublicHealth #Genomics

Revolutionizing infectious disease surveillance: Multi-omics technologies and AI-driven integration

This review highlights how integrating #NextGenSequencing, #multiomics, and #AI transforms #PathogenSurveillance, enabling #outbreak prediction and #biomarker discovery while addressing challenges of bias, ethics, and global collaboration. #MedSky

#OpenAccess: doi.org/10.1016/j.dc...

PathogenSurveillance: an automated pipeline for population genomic analyses and pathogen identification. #PathogenSurveillance #Nextflow #Bioinformatics #WGS #PathogenIdentification @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...

ganon2 offers scalable, up-to-date #metagenomic classification with fast incremental indexing and accurate taxonomic binning, designed to keep pace with exploding public sequence repositories. #PathogenSurveillance #Bioinformatics 🚀🧬🔎
📄https://doi.org/10.1093/nargab/lqaf094
👤EVBC: Knut Reinert

A deep amplicon sequencing approach for detection of filarial nematodes in mosquitoes. This paper also discusses potential applications as a molecular xenomonitoring tool for public health and veterinary medicine. www.biorxiv.org/content/10.1...

#nanopore #pathogensurveillance #filariasis #NTD

Great to hear from @nisbetalice.bsky.social who shared new insights into how Salmonella Paratyphi A adapts during long-term, asymptomatic carriage 👀

#MicrobialGenomics #PathogenSurveillance #PublicHealth #Microbiology #EntericFever #Salmonella #ECR #MNGPopUp @quadraminstitute.bsky.social

Highlight of #SHiMR2025: an insightful keynote from Nabil-Fareed Alikhan on #EntericPathogens, #COVID19 genomics, and how #bioinformatics, large-scale #genomics and open software are shaping global #PublicHealth responses.
#COGUK #PathogenSurveillance #NTU_Metabolic #BigData #NTU #NTU_Metabolic

April Data Sharing and Reuse Seminar | Data Science at NIH

🚨 Tomorrow! 🧬NCBI Pathogen Detection is hosting a public seminar showcasing how their open data resource is being used by researchers and public health professionals.

📅 April 11 | 🕒 12:00 p.m.–1:00p.m. ET
datascience.nih.gov/news/april-2...

#PathogenSurveillance #DataSharing #RadicalTransparency

Detection of Paracoccus yeei in Spontaneous Bacterial Peritonitis using Rapid, Long Read Sequencing Ascites is a common complication in patients with decompensated liver cirrhosis. Spontaneous bacterial peritonitis (SBP) is the most frequent infection, affecting up to 30% of hospitalized patients…

Paracoccus yeei detected using real-time, long read metagenome sequencing of cirrhotic ascites from a patient diagnosed with spontaneous bacterial peritonitis.
#nanopore #metagenomics #pathogensurveillance

agriculture research job

Head of Pest & #PathogenSurveillance - #AFBI Newforge
#AgriFood and #Biosciences Institute #Applynow
shorturl.at/QFA4r

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#Phd #postdoc #JobnewsTimes
#ResearchJob

Stephen Stockdale is at the Human Biology Building, University of Galway for #VIBEICBG2024 until 4pm. This symposium, led by SFI CRT PhD students, highlights advances in #GenomicsDataScience, #CancerGenomics, #Agrigenomics, and #PathogenSurveillance. #NGSExperts #GenomicsResearch #UniversityOfGalway