Empiric #azithromycin alters the upper respiratory #microbiome and #resistome without anti-inflammatory benefit in #COVID19

Empiric #azithromycin alters the upper respiratory #microbiome and #resistome without anti-inflammatory benefit in #COVID19, etidiohnew.blogspot.com/2026/03/empi...

Temporal dynamics and microbial interactions shaping the gut resistome in early infancy - Nature Communications Here the authors show that antibiotic resistance genes peak in the gut at the age of 6 months, and that beneficial bifidobacteria produce aromatic lactic acids that actively inhibit antimicrobial…

Temporal dynamics and #microbial interactions shaping the #gut #resistome in early infancy ...

| #antimicrobialresistance | #AMR | #antibiotic | #genes | #Ecoli | Via @nature.com

The food-associated resistome is shaped by processing and production environments - Nature Microbiology Whole-metagenome sequencing of 1,780 raw-material, end-product and surface samples from 113 food processing facilities reveals the occurrence of antimicrobial resistance determinants in foods and thei...

🔗 Read the full paper: www.nature.com/articles/s41...

📖 Quijada et al., 2025 – Nature Microbiology (@nature.com)

#IBFG #AntibioticResistance #Microbiology #Research #FoodMicrobiome #Resistome #bioscience #Science

High resistance gene load predicted a similar level increase in the relative risk of all-cause mortality as high blood pressure or type 2 diabetes. Thus, #resistome profiling may serve as a novel biomarker for long-term health risk influenced by #socio-demographic factors.

We carried out a large-scale analysis of the gut antibiotic #resistome in FINRISK 2002, a representative population cohort of over 6,500 Finnish adults who were prospectively followed up for 17 years after the sample collection.

Read the study that highlights the effectiveness of combining #Wastewater-BasedEpidemiology with #metagenomics to gain critical insights into the distinct #resistome and #microbiome profiles in hospital settings, in the latest Journal of #Infection 👉 www.journalofinfecti...

Global health risks lurking in livestock resistome A risk-assessment framework uncovers the global health risks associated with livestock resistomes.

Global health risks lurking in livestock #resistome | Science Advances www.science.org/doi/10.1126/...

Environmental drivers of the resistome across the Baltic Sea - Microbiome Background Antimicrobial resistance is a major global health concern, with the environment playing a key role in its emergence and spread. Understanding the relationships between environmental factors...

Our study on the Baltic Sea ecosystem was published in #Microbiome! Here, we profiled the resistome of the Baltic Sea and investigated how environmental factors, salinity, temperature, and nutrient availability, shape microbial communities and resistance mechanisms in the region. #Resistome #AMR

Spatio‐temporal characteristics of the gastrointestinal resistome in a cow‐to‐calf model and its environmental dissemination in a dairy production system This study revealed spatio-temporal characteristics of gastrointestinal resistome in a cow-to-calf model and the pattern of their spread to the environment and offspring in the dairy production syste....

Spatio‐temporal characteristics of the gastrointestinal #resistome in a cow‐to‐calf model and its environmental dissemination in a dairy production system onlinelibrary.wiley.com/doi/10.1002/...
#Antibiotics #ARG #MGE #Bioinformatics

📈 The water resistome showed clear increases in several ARGs (e.g., sul1, blaOXA-58, vanA).
These changes were statistically linked to the WWTP effluent—so the pollution is real.
But fish don’t seem to be good indicators for it.
#Antibiotics #Resistome

5/7

#Microplastics Mobile resistome
Guruge and Goswami, et al., #Plastiome: Plastisphere-enriched mobile #resistome in aquatic environments. Journal of Hazardous Materials, 471, Article 134353.
orbit.dtu.dk/en/publicati...

Deciphering comprehensive profiles of pathogenies and resistome of pork using integrating metagenomic and isolation strategies The pork microbiome was investigated using an integrated approach combining isolation and metagenomic sequencing methods to comprehensively analyze the pathogens and resistome on pork surfaces. The s...

Deciphering comprehensive profiles of #pathogenies and #resistome of pork using integrating #metagenomic and isolation strategies #iMetaOmics onlinelibrary.wiley.com/doi/full/10....
#microbiome #metagenomics #pathogen #bioinformatics

Dr Liwang Cui highlights Elizabeth Winzeler & colleagues’ @science.org article predicting #Plasmodium #drug #resistance through #invitro #evolution. #Malaria #Resistome #Genomics @usouthflorida.bsky.social @ucsdpharmacy.bsky.social @ucsandiego.bsky.social

authors.elsevier.com/a/1kavV_XTJP...

Impact of early life antibiotic and probiotic treatment on gut microbiome and resistome of very-low-birth-weight preterm infants Preterm infants (<37 weeks’ gestation) are often administered broad-spectrum antibiotics in hospitals due to their vulnerability to severe morbidity, including necrotising enterocolitis and sepsis. Ho...

Starting the new year with a new pre-print from the Hall Lab @halllab.bsky.social looking at the impact of empirical antibiotics on gut microbiome and resistome of both probiotic and non-probiotic supplemented VLBW preterm infants: www.biorxiv.org/content/10.1...
#resistome #amr #microbiome #preterm

Hey everyone! Looking for tools/pipelines for AMR risk assessment from metagenomic data. Any suggestions? 🤔 #AMR #metagenomics #resistome

1st selected talk:
⭐️ Development of early life gut #resistome and #mobilome across gestational ages and microbiota-modifying treatments
by Ahmed Bargheet