eggNOG v7, the first release implementing a fully phylogenetic, domain-centric workflow - Speciation and duplication events are detected using a noise-tolerant algorithm to generate hierarchically consistent, evolutionarily dated OGs academic.oup.com/nar/advance-... #orthology #evolution
Interested in the newest developments in orthology? Check out the last Quest for Orthologs (QfO9) meeting report:
link.springer.com/article/10.1...
#orthology #function #domains #AI #paralogy
Thanks to @sinamajidian.bsky.social and all co-authors for their valuable contribution.
Ryan Moreno from @sroyyors.bsky.social Lab presented "Integrating single-cell omics data across species using matrix factorization regularized by gene-level phylogenies"
A very cool application of gene orthology across species for single-cell expression analysis! #orthology #GI2025 #singlecell
Did you miss our @veupathdb.org OrthoMCL-7 webinar on Tuesday? Not to worry - the recorded webinar is now available for on-demand learning! #orthology #data
๐น Check it out here: www.youtube.com/watch?v=htZq...
Thanks to the keen eyes of the reviewers we were able to fix a colour palette issue in the local synteny view https://f1000research.com/articles/12-936 DrosOMA: the #Drosophila Orthologous Matrix browser #genome #genomics #orthology #evolution https://drosoma.unil.ch/oma/home/
Evolutionary #genomics 3-year #Postdoc in Switzerland ๐จ๐ญ @DEE_UNIL & Swiss Institute of #Bioinformatics ๐ฉโ๐ป๐จโ๐ป @ISBSIB computational #biology #programming #orthology #gene & #genome ๐งฌ #evolution #phylogenetics. Please forward info to potential candidates...
3-year @snsf_ch #Postdoc in evolutionary #genomics #Lausanne Switzerland @unil @DEE_UNIL Swiss Institute of #Bioinformatics @ISBSIB seeking candidates with computational #programming skills interested in #orthology #gene & #genome #evolution #phylogenetics...
A bit gruffly, so apologies for the throat clearing: i5k webinar #OrthoDB #Orthology #Homology #Evolution #BUSCOv2 https://www.youtube.com/watch?v=cswNRFLMTN4
Also #OrthoDB #orthology #evolution http://www.orthodb.org
Computational #Gene Discovery @PAGmeeting #PAGXXV
Sun 15th 10:50 Pacific Salon 3 twitter.com/rmwaterhouse/status/8195...
Please bear with us as #OrthoDB v9 is down for maintenance, you can still use v8 #orthology: http://www.orthodb.org/v8
#BUSCO v2 will use OrthoDB v9 #orthology so send lineage requests e.g. #Diptera 4031 near-universal-SC ortho-groups www.orthodb.org/
OrthoDBv9 #gene #orthology - 5813 universal single-copy ortho-groups across 20 #primates www.orthodb.org/ also access with #JSON #API
Learn about @ISBSIB #bioinformatics resources including #OrthoDB and #OMA #orthology @NAR_Open nar.oxfordjournals.org/content/early/2015/11/27...