AI for Genomics: From CNNs and LSTMs to Transformers 7-9 April 2026 To foster international participation, this course will be held online

There are only 2 seats left for the #AI for #Genomics course with @oskolkov.bsky.social starting next week.

If interested, check it out: www.physalia-courses.org/courses-work...

#Bioinformatics #CNNs #LSTMs #Transformers

I always forget how to do 'anything but' matches in #bash

ls *[^m].1.fq.gz

Will match files that end in `.1.fq.gz`, *unless* they have an `m` immediately before the suffix.

i.e.,

NSPB-M3.1.fq.gz

matches, but

NSPB-M3.rem.1.fq.gz

doesn't.

#bioinformatics

Last day to register... 𝗗𝗮𝘁𝗮 𝗦𝗰𝗶𝗲𝗻𝗰𝗲 𝗳𝗼𝗿 𝗕𝗶𝗼𝗹𝗼𝗴𝗶𝘀𝘁𝘀 from 1 - 27 April 2026.
bioinfo.guru/workshops

#Bioinformatics #Biotechnology #Biochemistry #LifeSciences #Biosciences #Microbiology #Genetics #Genomics #Proteomics #Pharmacology #DataScience #Biopython #MachineLearning #UpSkill 
#bioinfoGuru

Working with proteomics data?
Discover how bioinformatics analysis can reveal the hidden insights in your data!
Request our sample proteomics data analysis report today at
www.fiosgenomics.com/plasma-proteome-analysis...
#bioinformatics #drugdevelopment

QHap: GPU-Accelerated Quantum-Inspired Haplotype Phasing via Max-Cut Optimization

QHap reformulates haplotype phasing as a Max-Cut problem solved via GPU-accelerated ballistic simulated bifurcation, achieving 4–20× speedup over HapCUT2/WhatsHap with zero switch error on MHC region across CycloneSEQ, HiFi, and ONT platforms.

#QuantumInspired #HaplotypePhasing #Bioinformatics

This case study shows how integrated #RNA-seq and whole exome sequencing support mechanism-of-action validation in early oncology trials.
See what we found out! 👀
www.fiosgenomics.com/wes-and-rna-seq-analysis...

#bioinformatics

#Bioinformatics helps researchers speed up #Cell&GeneTherapy development and reduce costs. Learn more in our whitepaper, "Advancing Cell & Gene Therapy Research with Bioinformatics".
Access it via our blog:
www.fiosgenomics.com/make-advances-in-cell-an...

📢 New PhD Opportunity at @tum.de! 🎓

TUM is recruiting a Doctoral Candidate (f/m/d) in Computational #Proteomics/ #Bioinformatics.

🧪 Focus: Mapping dynamic protein networks
💻 Stack: ProteomicsDB, Python/R, Database Design.
⏳ Duration: 4 years (Full-time).

Check out:
🔗 www.denbi.de/news1/2077-d...

Banner showing that early bird registration for the ECCB conference ends on 31 March.

⏰ That moment when you realize early-bird for #ECCB2026 ends… tomorrow.
Do not be that person refreshing the page on 1 April.
No pressure, but… a little bit.
👉 Register: eccb2026.org/registration...

#LastMinutePerson #ProcrastinatorsWelcome
#GenevaLovesData #Bioinformatics #ComputationalBiology

INTRODUCTION | ABI Bioinformatics Guide 2024 Contemporary medicine, pharmaceuticals, and biotechnology have become increasingly data-driven fields, where the analysis of large-scale biological data serves as a cornerstone of progress and…

💡 #KnowledgeHighlight | A Bioinformatics Guide by the Armenian Bioinformatics Institute
edu.abi.am 🖥️ 🧬

Explore open-access training materials in the ERGA #KnowledgeHub ➡️ knowledge.erga-biodiversity.eu
#guide #genomics #bioinformatics

Arzeda and MANE Join Forces to Bring a Better Stevia at Scale - SynBioBeta Arzeda and MANE Join Forces to Bring a Better Stevia at Scale    SynBioBeta

Industry news of the day · 30.03.26
Arzeda and MANE Join Forces to Bring a Better Stevia at Scale - SynBioBeta
Arzeda and MANE Join Forces to Bring a Better Stevia at Scale    SynBioBeta
Subnewsletter
#ProteinDesign #StructuralBiology #Bioinformatics #ProteinEngineering

OpenAI's Sam Altman and Science VP Kevin Weil hype AI-assisted dog cancer story ignoring there's no proof the vaccine... OpenAI's Sam Altman and Science VP Kevin Weil hype AI-assisted dog cancer story ignoring there's no proof the vaccine worked   ...

AI news of the day · 30.03.26
OpenAI's Sam Altman and Science VP Kevin Weil hype AI-assisted dog cancer story ignoring there's no proof the vaccine worked - the-decoder.com
OpenAI's Sam Altman and Science VP Kevin...
Subnewsletter
#ProteinDesign #StructuralBiology #Bioinformatics #ProteinEngineering

Paper of the day · 30.03.26
FastMDAnalysis: Software for Automated Analysis of Molecular Dynamics Trajectories.
The analysis of molecular dynamics (MD) trajectories remain...
Subnewsletter
#ProteinDesign #StructuralBiology #Bioinformatics #ProteinEngineering

I really appreciated this detailed post from Nicola Zamboni on #bioinformatics for #metabolomics !

metabolomics.blog/2026/03/how-we-analyze-u...

▶️Understanding your research
▶️Collaborative culture
These are the values that set us apart, and why our clients choose to work with us.
Want to learn more?
Visit 👇:
www.fiosgenomics.com/what-makes-fios-genomics...
#bioinformatics

#Alzheimers #health #bioinformatics

Transient elevation of GSK-3β
promotes memory consolidation
and fights glioma and infections.

Then GSK-3β needs to be inactivated by PI3K/AKT
to prevent
chronic inflammation
and Alzheimer's disease.

Pollutants (6PPDQ, arsenic)
can inhibit the PI3K/AKT pathway.

MIG Workshop: Single cell RNA-seq analysis About the Event This workshop will give you the necessary foundations to get started with single cell RNA-seq analysis, using the R programming...

📢 MIG Workshop: Single cell RNA-seq analysis

🗓️ Thu, Apr 16 | ⏰ 9:30 am - 12:00 pm AEDT
📍 Zoom (registered participants only)
🎙️ Xiaochen Zhang
💰 $25 (fully refunded upon attendance)

#scRNAseq #Bioinformatics #Rstats #Genomics

DeeDeeExperiment: Building an infrastructure for integrating and managing omics data analysis results in R/Bioconductor AbstractSummary. Modern omics experiments now involve multiple conditions and complex designs, producing an increasingly large set of differential expressi

From @guigadraws.bsky.social & colleagues in #OUP 's #Bioinformatics journal | DeeDeeExperiment: Building an infrastructure for integrating and managing omics data analysis results in R/Bioconductor | #RStats #Bioconductor #Bioinformatics #OpenScience | 🧬 🖥️ 🧪🔓
⬇️
academic.oup.com/bioinformati...

#biodiversity #bioinformatics Summer School .. 21-26 June in Siegen, Germany co-organised by @sib.swiss & @denbi.bsky.social
www.sib.swiss/training/cou...
🟢 eDNA & ecosystems
🟣 pangenome diversity
🔵 population genetics
🟡 comparative genomics
Register now, we are reviewing applications already!

A new study by Runfeng Lin & Sebastian Ahnerton from Cambridge University on the application of Circuit Topology in Protein Science:

"Millisecond Prediction of Protein Contact Maps from Amino Acid Sequences"
www.biorxiv.org/content/10.6...

#ChemSky #Topology #StructuralBiology #Bioinformatics

What are your go-to resources for scientific visualization? Do you have a favorite chart type that everyone else seems to hate? (I’m looking at you, pie charts... 🥧)

#Bioinformatics #OpenScience #DataViz #ScientificCommunication [5/5]

As usual, we've had a great time presenting our projects at the 7th Central German Meeting on #Bioinformatics - Mittelerde Meeting 2026 at @unihalle.bsky.social! 🧬⚕️🦠🌡️🔧🖥️
Thanks to the organizers and sponsors!
#epigenomics #diagnostics #methylation #ncRNA #adaption #Sugar #DataEngineering #metadata

These are the hashes i follow: Collection of hashes that are important for the areas that i work
#chemsky #compchem #cheminformatics #machinelearning #drugdiscovery #bioinformatics #deeplearning #neuralnetwork #networks #biological #DeepLearning #ML #LargeLanguageModels #ML #MachineLearning

Plant genome sequence assembly and annotation workflow. Figure source: https://doi.org/10.1186/s12864-026-12623-z

Interested in the genetic secrets of your favorite plant?

A genome sequence might reveal them. We wrote down a workflow from DNA extraction & sequencing to genome sequence assembly & annotation. It includes a hands-on guide with example commands.

doi.org/10.1186/s128...

#Genomics #Bioinformatics

A Strategic Partnership to Advance AI Applications in Genomics and Bioinformatics for Health Innovation Background: Late 2025, JMIR Bioinformatics and Biotechnology (JBB) is pleased to announce a new strategic partnership with the MidSouth Computational Biology and Bioinformatics Society (MCBIOS), under which JBB will serve as the official journal of MCBIOS. This collaboration represents a shared commitment to advancing computational biology, bioinformatics, and biotechnology through open science, interdisciplinary collaboration, and real-world impact. At a time when biological discovery and health innovation are increasingly driven by large-scale data, artificial intelligence (AI), and computational methodologies, this partnership reflects a shared vision: to bridge bioinformatics, data science, AI, and innovation to transform health. Together, JBB and MCBIOS aim to provide a scholarly home for research that not only advances methods and technologies, but also demonstrates meaningful applications across biomedical, clinical, and population health contexts. Objective: N/A Methods: N/A Results: N/A Conclusions: N/A

A Strategic Partnership to Advance AI Applications in Genomics and Bioinformatics for Health Innovation #AI #Bioinformatics #ComputationalBiology #HealthInnovation #Genomics

Explore more DO-powered research at github.com/DiseaseOntol...

#DiseaseResearch #Biocuration #Bioinformatics #FAIR #ComputationalBiology

Unit 5 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes This module introduces key concepts in bioinformatics, focusing on Multiple Sequence Alignment (MSA) and Expressed Sequence Tags (ESTs). You will learn how biological sequences are aligned to identify conserved regions, infer evolutionary relationships, and predict structure and function. The content also covers major MSA methods, tools like ClustalW and T-Coffee, and explains how ESTs are generated and used for gene discovery, genome annotation, and functional genomics.

Learn MSA methods, tools like ClustalW, T-Coffee, and ESTs for gene discovery, alignment, and bioinformatics analysis. #rathbiotaclan #studentportal #bioinformatics #MultipleSequenceAlignment #EST

Unit 4 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes This module introduces the core concepts of sequence alignment and its central role in bioinformatics. You will learn how DNA, RNA, and protein sequences are compared to identify similarities, conserved regions, and evolutionary relationships. The content explores different types of alignments, scoring matrices such as PAM and BLOSUM, and widely used tools like BLAST and FASTA. It also covers advanced algorithms including Smith–Waterman and PSI-BLAST, along with concepts like PSSM, helping you understand how sequence analysis supports functional prediction, evolutionary studies, and modern biological research.

Learn sequence alignment, BLAST, FASTA, PAM, BLOSUM, and scoring matrices with applications in bioinformatics. #studentportal #rathbiotaclan #bioinformatics

Unit 1 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes What is database model ? Describe various data model and explain the detail about object oriented relational data model. What is SQL ? Write down about the Data Definition Language. What is DBMS ? How to interact with the DBMS ? Explain in detail SQL statements for creating a table, joining two tables, insert data into the table, updating data in a table.

Full Detailed Notes On Unit 1 - Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes #rathbiotaclan #studentportal #database #bioinformatics

Punctual for the Friday wrap-up: The #BioFabric session is live! 🚀

We get straight into the logic and code to turn network "hairballs" into structured, readable data.

Watch the full session: www.youtube.com/watch?v=Dk0o...

#DataViz #Bioinformatics